Chain sequence(s) |
A: MTQQGAALQNYNNELVKCIEELCQKREELCRQIQEEEDEKQRLQNEVRQLTEKLARVNENLARKIASRNEFDRTIAETEAAYLKILESSQTLLSVLKREAGNLTKATAPDQKSSGGRDS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | EK20A,EK21A,KE105A,KE112A,RE117A |
Energy difference between WT (input) and mutated protein (by FoldX) | 1.84907 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:01:06) [INFO] FoldX: Starting FoldX energy minimalization (00:02:31) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:27) [INFO] Main: Simulation completed successfully. (00:03:28) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.3055 | |
2 | T | A | -0.5119 | |
3 | Q | A | -1.4152 | |
4 | Q | A | -1.3524 | |
5 | G | A | -0.9246 | |
6 | A | A | -1.0088 | |
7 | A | A | -0.8760 | |
8 | L | A | -0.4918 | |
9 | Q | A | -2.0091 | |
10 | N | A | -1.8889 | |
11 | Y | A | -0.4847 | |
12 | N | A | -1.5867 | |
13 | N | A | -1.8324 | |
14 | E | A | -1.9074 | |
15 | L | A | -0.1668 | |
16 | V | A | 0.5131 | |
17 | K | A | -1.0945 | |
18 | C | A | -0.1414 | |
19 | I | A | 0.9710 | |
20 | K | A | -1.7741 | mutated: EK20A |
21 | K | A | -2.4514 | mutated: EK21A |
22 | L | A | -1.4037 | |
23 | C | A | -1.9487 | |
24 | Q | A | -3.4618 | |
25 | K | A | -3.9320 | |
26 | R | A | -3.9013 | |
27 | E | A | -3.6975 | |
28 | E | A | -3.5155 | |
29 | L | A | -1.5488 | |
30 | C | A | -1.7318 | |
31 | R | A | -3.7340 | |
32 | Q | A | -3.0395 | |
33 | I | A | -1.9947 | |
34 | Q | A | -3.8305 | |
35 | E | A | -5.0359 | |
36 | E | A | -5.7100 | |
37 | E | A | -5.6436 | |
38 | D | A | -5.2345 | |
39 | E | A | -5.6895 | |
40 | K | A | -5.6954 | |
41 | Q | A | -4.9885 | |
42 | R | A | -4.7992 | |
43 | L | A | -2.8355 | |
44 | Q | A | -3.1828 | |
45 | N | A | -3.7775 | |
46 | E | A | -3.1164 | |
47 | V | A | -1.0908 | |
48 | R | A | -2.9006 | |
49 | Q | A | -2.5380 | |
50 | L | A | -1.0174 | |
51 | T | A | -1.1956 | |
52 | E | A | -2.3019 | |
53 | K | A | -1.6169 | |
54 | L | A | -0.6039 | |
55 | A | A | -1.5749 | |
56 | R | A | -2.4944 | |
57 | V | A | -0.9296 | |
58 | N | A | -2.2309 | |
59 | E | A | -3.2209 | |
60 | N | A | -2.3182 | |
61 | L | A | -1.1892 | |
62 | A | A | -1.7833 | |
63 | R | A | -2.8865 | |
64 | K | A | -2.6930 | |
65 | I | A | -0.5185 | |
66 | A | A | -1.4817 | |
67 | S | A | -2.1319 | |
68 | R | A | -2.8949 | |
69 | N | A | -2.6066 | |
70 | E | A | -2.5617 | |
71 | F | A | -0.6553 | |
72 | D | A | -2.4727 | |
73 | R | A | -2.9168 | |
74 | T | A | -1.3602 | |
75 | I | A | 0.0385 | |
76 | A | A | -1.3166 | |
77 | E | A | -2.1040 | |
78 | T | A | -1.1477 | |
79 | E | A | -1.4817 | |
80 | A | A | -0.7780 | |
81 | A | A | -0.0903 | |
82 | Y | A | 0.5317 | |
83 | L | A | 0.3948 | |
84 | K | A | -0.8281 | |
85 | I | A | 1.1929 | |
86 | L | A | 0.7378 | |
87 | E | A | -1.2751 | |
88 | S | A | -0.2603 | |
89 | S | A | 0.2751 | |
90 | Q | A | -0.5180 | |
91 | T | A | 0.6623 | |
92 | L | A | 1.6916 | |
93 | L | A | 0.8751 | |
94 | S | A | 0.2896 | |
95 | V | A | 1.0355 | |
96 | L | A | 0.2060 | |
97 | K | A | -1.7887 | |
98 | R | A | -2.5790 | |
99 | E | A | -2.6672 | |
100 | A | A | -1.7159 | |
101 | G | A | -2.1685 | |
102 | N | A | -2.5265 | |
103 | L | A | -0.6448 | |
104 | T | A | -1.1318 | |
105 | E | A | -2.0325 | mutated: KE105A |
106 | A | A | -0.8924 | |
107 | T | A | -0.6704 | |
108 | A | A | -1.1315 | |
109 | P | A | -1.9364 | |
110 | D | A | -3.1026 | |
111 | Q | A | -3.1331 | |
112 | E | A | -3.2584 | mutated: KE112A |
113 | S | A | -2.0336 | |
114 | S | A | -1.5589 | |
115 | G | A | -1.8260 | |
116 | G | A | -2.3023 | |
117 | E | A | -3.1199 | mutated: RE117A |
118 | D | A | -3.0115 | |
119 | S | A | -1.6112 |