| Chain sequence(s) |
L: RTFRQVQSSISDFYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 96 | R | L | -1.8566 | |
| 97 | T | L | -0.0462 | |
| 98 | F | L | 1.7387 | |
| 99 | R | L | -1.7000 | |
| 100 | Q | L | -1.2500 | |
| 101 | V | L | 1.3890 | |
| 102 | Q | L | -0.3770 | |
| 103 | S | L | -0.3149 | |
| 104 | S | L | -0.1428 | |
| 105 | I | L | 0.5937 | |
| 106 | S | L | -0.4298 | |
| 107 | D | L | -1.4663 | |
| 108 | F | L | 1.8454 | |
| 109 | Y | L | 1.3465 | |
| 110 | D | L | -1.5492 |