| Chain sequence(s) |
A: KLDEMAEIVLDMAR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.9552 | |
| 2 | L | A | -0.8018 | |
| 3 | D | A | -2.5529 | |
| 4 | E | A | -2.7950 | |
| 5 | M | A | -0.5075 | |
| 6 | A | A | -0.5153 | |
| 7 | E | A | -0.9064 | |
| 8 | I | A | 1.2337 | |
| 9 | V | A | 2.3525 | |
| 10 | L | A | 1.3904 | |
| 11 | D | A | -0.4103 | |
| 12 | M | A | 0.9303 | |
| 13 | A | A | 0.1433 | |
| 14 | R | A | -1.4433 |