| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGFTFRTSLGWFRQAPGQGLEAVAAIASMGGLTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAVRDYDSTDYASHNFRYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20)
[INFO] Main: Simulation completed successfully. (00:01:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4804 | |
| 2 | V | H | -1.0435 | |
| 3 | Q | H | -1.0649 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.6218 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1910 | |
| 8 | G | H | -0.5592 | |
| 9 | G | H | 0.2720 | |
| 10 | G | H | 0.7097 | |
| 11 | L | H | 1.3387 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.5336 | |
| 14 | P | H | -2.0187 | |
| 15 | G | H | -1.7808 | |
| 16 | G | H | -1.2668 | |
| 17 | S | H | -1.4911 | |
| 18 | L | H | -0.7489 | |
| 19 | R | H | -1.5558 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.3228 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2178 | |
| 24 | A | H | -0.4960 | |
| 25 | S | H | -0.9456 | |
| 26 | G | H | -0.8847 | |
| 27 | F | H | -0.8385 | |
| 28 | T | H | -0.2522 | |
| 29 | F | H | -0.5320 | |
| 30 | R | H | -1.9888 | |
| 31 | T | H | 0.0000 | |
| 32 | S | H | 0.0000 | |
| 33 | L | H | 0.0000 | |
| 34 | G | H | 0.0000 | |
| 35 | W | H | 0.0000 | |
| 36 | F | H | 0.0000 | |
| 37 | R | H | 0.0000 | |
| 38 | Q | H | -0.6916 | |
| 39 | A | H | -0.9659 | |
| 40 | P | H | -0.9015 | |
| 41 | G | H | -1.2813 | |
| 42 | Q | H | -1.8422 | |
| 43 | G | H | -1.2376 | |
| 44 | L | H | -0.4435 | |
| 45 | E | H | -1.0028 | |
| 46 | A | H | -0.3880 | |
| 47 | V | H | 0.0000 | |
| 48 | A | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | I | H | 0.0000 | |
| 51 | A | H | 0.0000 | |
| 52 | S | H | -0.4398 | |
| 53 | M | H | 0.3718 | |
| 54 | G | H | 0.1948 | |
| 55 | G | H | 0.3458 | |
| 56 | L | H | 1.1074 | |
| 57 | T | H | 0.8367 | |
| 58 | F | H | 0.5379 | |
| 59 | Y | H | -0.4414 | |
| 60 | A | H | -1.2055 | |
| 61 | D | H | -2.3518 | |
| 62 | S | H | -1.8305 | |
| 63 | V | H | 0.0000 | |
| 64 | K | H | -2.5168 | |
| 65 | G | H | -1.9027 | |
| 66 | R | H | -1.8787 | |
| 67 | F | H | 0.0000 | |
| 68 | T | H | -0.8256 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.5250 | |
| 71 | R | H | -1.0081 | |
| 72 | D | H | -1.8179 | |
| 73 | N | H | -2.4092 | |
| 74 | S | H | -1.9344 | |
| 75 | K | H | -2.5675 | |
| 76 | N | H | -1.9998 | |
| 77 | T | H | -1.1140 | |
| 78 | L | H | 0.0000 | |
| 79 | Y | H | -0.4048 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -1.2246 | |
| 82 | M | H | 0.0000 | |
| 83 | N | H | -2.1878 | |
| 84 | S | H | -1.7936 | |
| 85 | L | H | 0.0000 | |
| 86 | R | H | -3.1373 | |
| 87 | A | H | -2.1108 | |
| 88 | E | H | -2.5069 | |
| 89 | D | H | 0.0000 | |
| 90 | T | H | -0.5314 | |
| 91 | A | H | 0.0000 | |
| 92 | V | H | 0.9408 | |
| 93 | Y | H | 0.0000 | |
| 94 | Y | H | 0.3512 | |
| 95 | C | H | 0.0000 | |
| 96 | A | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | V | H | 0.0000 | |
| 99 | R | H | -2.0720 | |
| 100 | D | H | -1.9325 | |
| 101 | Y | H | -0.6770 | |
| 102 | D | H | -1.5808 | |
| 103 | S | H | -1.2048 | |
| 104 | T | H | -1.0585 | |
| 105 | D | H | -2.0428 | |
| 106 | Y | H | -1.0071 | |
| 107 | A | H | -0.9338 | |
| 108 | S | H | -1.0686 | |
| 109 | H | H | -1.6899 | |
| 110 | N | H | -1.8261 | |
| 111 | F | H | 0.0000 | |
| 112 | R | H | -2.1013 | |
| 113 | Y | H | -0.7361 | |
| 114 | W | H | -0.0946 | |
| 115 | G | H | -0.1223 | |
| 116 | Q | H | -0.8857 | |
| 117 | G | H | 0.0000 | |
| 118 | T | H | 0.6510 | |
| 119 | L | H | 1.7830 | |
| 120 | V | H | 0.0000 | |
| 121 | T | H | 0.2433 | |
| 122 | V | H | 0.0000 | |
| 123 | S | H | -0.9508 |