Project name: 11_i14e7_x4e7_i20e6_x11e6

Status: done

Started: 2025-08-11 19:08:25
Settings
Chain sequence(s) A: AAYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:10)
Show buried residues

Minimal score value
-4.366
Maximal score value
3.7589
Average score
-0.33
Total score value
-85.4802

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2406
2 A A 0.0171
3 Y A 0.2053
4 R A -1.0730
5 A A -0.1182
6 H A 0.4781
7 Y A 1.4953
8 N A 1.0331
9 I A 2.8332
10 V A 3.2959
11 T A 2.7113
12 F A 3.5287
13 A A 2.7525
14 A A 1.9364
15 Y A 2.2565
16 T A 1.7410
17 L A 2.3811
18 Q A 1.0220
19 D A 0.4411
20 I A 2.5501
21 V A 2.9683
22 L A 2.5134
23 H A 1.7430
24 L A 3.2144
25 A A 2.8096
26 A A 2.7307
27 Y A 3.4623
28 L A 3.4956
29 L A 3.3183
30 M A 3.3205
31 G A 2.4705
32 T A 2.7788
33 L A 3.3895
34 G A 2.4513
35 I A 3.7138
36 V A 3.7589
37 A A 2.3313
38 A A 2.2236
39 Y A 2.8166
40 L A 1.6366
41 P A -0.1732
42 A A -1.1260
43 R A -3.0064
44 R A -3.3732
45 A A -2.5846
46 E A -3.1956
47 P A -1.7834
48 Q A -1.6164
49 A A -0.1262
50 A A 1.1416
51 Y A 2.5020
52 L A 3.2773
53 L A 2.5439
54 C A 1.0302
55 H A -0.9571
56 E A -2.0531
57 Q A -1.8160
58 L A -0.3712
59 S A -1.2152
60 D A -2.3960
61 S A -2.5059
62 E A -3.8916
63 E A -4.3598
64 E A -4.2709
65 N A -3.8854
66 D A -3.3682
67 G A -2.1467
68 P A -1.3322
69 G A -1.4915
70 P A -1.1175
71 G A -1.5772
72 Q A -1.8756
73 S A -1.5305
74 T A -1.3196
75 H A -1.2621
76 V A -0.5603
77 D A -1.3960
78 I A 0.5144
79 R A -1.3064
80 T A -0.4694
81 L A 0.9959
82 E A -0.9244
83 D A -1.1376
84 L A 1.2404
85 L A 1.9830
86 M A 1.1923
87 G A -0.0455
88 P A -0.7394
89 G A -0.8370
90 P A -0.7823
91 G A -0.8299
92 T A -0.4103
93 P A -0.1757
94 T A 0.0592
95 L A 0.6417
96 H A -0.7867
97 E A -1.6535
98 Y A -0.3502
99 M A -0.5924
100 L A -0.1684
101 D A -1.0230
102 L A -0.4410
103 Q A -1.8377
104 P A -1.9812
105 E A -2.4289
106 T A -1.8261
107 G A -1.5800
108 P A -0.8398
109 G A -0.7771
110 P A -0.6035
111 G A -0.5230
112 L A -0.0585
113 Q A -1.5982
114 D A -1.4249
115 I A 0.9169
116 V A 1.4975
117 L A 1.8353
118 H A 0.2531
119 L A 0.5794
120 E A -1.6623
121 P A -2.1845
122 Q A -2.4100
123 N A -2.4715
124 E A -1.8687
125 I A 0.3817
126 P A -0.3077
127 G A -0.6373
128 P A -0.6550
129 G A -0.7654
130 P A -0.2027
131 G A 0.1850
132 V A 1.8000
133 Y A 1.7067
134 D A 0.4893
135 F A 2.0313
136 A A 1.0069
137 F A 1.3352
138 R A -1.0702
139 D A -1.3478
140 L A 1.0376
141 A A 0.3380
142 A A 0.6500
143 Y A 1.1645
144 R A -0.3637
145 F A 1.1333
146 H A -0.4721
147 N A -0.6020
148 I A 1.0944
149 A A 0.1164
150 G A -0.5398
151 H A -0.6677
152 Y A 0.5776
153 A A 0.5932
154 A A 0.8602
155 Y A 2.1204
156 C A 1.8385
157 Y A 1.9561
158 S A 0.7803
159 L A 0.6114
160 Y A 0.3006
161 G A 0.1039
162 T A 0.3021
163 T A 0.4334
164 L A 0.4148
165 A A 0.2941
166 A A 0.6096
167 Y A 0.9248
168 K A -0.4095
169 T A 0.5141
170 V A 1.9646
171 L A 1.4924
172 E A 0.0729
173 L A 1.4320
174 T A 0.6450
175 E A -0.0635
176 V A 1.1754
177 A A 0.1510
178 A A -0.0808
179 Y A -0.0387
180 A A -0.7740
181 E A -2.4583
182 K A -2.5665
183 L A -1.7539
184 R A -3.5758
185 H A -3.0698
186 L A -1.9199
187 N A -3.6550
188 E A -4.2359
189 K A -4.0152
190 R A -3.7285
191 R A -3.1702
192 F A -0.6977
193 H A -1.5020
194 N A -1.8396
195 G A -1.3563
196 P A -1.2350
197 G A -0.9968
198 P A -1.0640
199 G A -0.8675
200 L A -0.5798
201 D A -2.5544
202 K A -3.4583
203 K A -3.0811
204 Q A -2.5224
205 R A -1.5326
206 F A 0.0308
207 H A -0.1117
208 N A 0.1243
209 I A 0.4321
210 R A -1.5821
211 G A -1.6206
212 R A -1.9521
213 W A -0.3795
214 T A -0.3623
215 G A -0.8570
216 P A -1.0352
217 G A -1.2340
218 P A -1.1812
219 G A -1.9759
220 N A -2.4339
221 P A -2.0278
222 A A -2.0631
223 E A -3.3618
224 K A -3.2131
225 L A -1.9226
226 R A -3.7225
227 H A -3.7384
228 L A -2.9312
229 N A -3.8148
230 E A -4.3660
231 K A -4.1854
232 R A -3.9795
233 R A -3.1463
234 F A -0.7983
235 G A -1.0170
236 P A -0.9714
237 G A -0.6883
238 P A -1.0656
239 G A -0.9978
240 S A -0.8569
241 K A -1.2532
242 I A 0.4919
243 S A -0.9403
244 E A -1.6135
245 Y A 0.2298
246 R A -0.8571
247 H A -0.6175
248 Y A 1.2192
249 C A 1.7467
250 Y A 2.0572
251 S A 1.4532
252 L A 2.5096
253 Y A 2.0584
254 G A 0.4438
255 G A -0.3884
256 P A -0.8065
257 G A -1.0110
258 P A -0.8236
259 G A -0.7415
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Laboratory of Theory of Biopolymers 2018