Chain sequence(s) |
A: AAYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:07) [INFO] Main: Simulation completed successfully. (00:05:10) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | -0.2406 | |
2 | A | A | 0.0171 | |
3 | Y | A | 0.2053 | |
4 | R | A | -1.0730 | |
5 | A | A | -0.1182 | |
6 | H | A | 0.4781 | |
7 | Y | A | 1.4953 | |
8 | N | A | 1.0331 | |
9 | I | A | 2.8332 | |
10 | V | A | 3.2959 | |
11 | T | A | 2.7113 | |
12 | F | A | 3.5287 | |
13 | A | A | 2.7525 | |
14 | A | A | 1.9364 | |
15 | Y | A | 2.2565 | |
16 | T | A | 1.7410 | |
17 | L | A | 2.3811 | |
18 | Q | A | 1.0220 | |
19 | D | A | 0.4411 | |
20 | I | A | 2.5501 | |
21 | V | A | 2.9683 | |
22 | L | A | 2.5134 | |
23 | H | A | 1.7430 | |
24 | L | A | 3.2144 | |
25 | A | A | 2.8096 | |
26 | A | A | 2.7307 | |
27 | Y | A | 3.4623 | |
28 | L | A | 3.4956 | |
29 | L | A | 3.3183 | |
30 | M | A | 3.3205 | |
31 | G | A | 2.4705 | |
32 | T | A | 2.7788 | |
33 | L | A | 3.3895 | |
34 | G | A | 2.4513 | |
35 | I | A | 3.7138 | |
36 | V | A | 3.7589 | |
37 | A | A | 2.3313 | |
38 | A | A | 2.2236 | |
39 | Y | A | 2.8166 | |
40 | L | A | 1.6366 | |
41 | P | A | -0.1732 | |
42 | A | A | -1.1260 | |
43 | R | A | -3.0064 | |
44 | R | A | -3.3732 | |
45 | A | A | -2.5846 | |
46 | E | A | -3.1956 | |
47 | P | A | -1.7834 | |
48 | Q | A | -1.6164 | |
49 | A | A | -0.1262 | |
50 | A | A | 1.1416 | |
51 | Y | A | 2.5020 | |
52 | L | A | 3.2773 | |
53 | L | A | 2.5439 | |
54 | C | A | 1.0302 | |
55 | H | A | -0.9571 | |
56 | E | A | -2.0531 | |
57 | Q | A | -1.8160 | |
58 | L | A | -0.3712 | |
59 | S | A | -1.2152 | |
60 | D | A | -2.3960 | |
61 | S | A | -2.5059 | |
62 | E | A | -3.8916 | |
63 | E | A | -4.3598 | |
64 | E | A | -4.2709 | |
65 | N | A | -3.8854 | |
66 | D | A | -3.3682 | |
67 | G | A | -2.1467 | |
68 | P | A | -1.3322 | |
69 | G | A | -1.4915 | |
70 | P | A | -1.1175 | |
71 | G | A | -1.5772 | |
72 | Q | A | -1.8756 | |
73 | S | A | -1.5305 | |
74 | T | A | -1.3196 | |
75 | H | A | -1.2621 | |
76 | V | A | -0.5603 | |
77 | D | A | -1.3960 | |
78 | I | A | 0.5144 | |
79 | R | A | -1.3064 | |
80 | T | A | -0.4694 | |
81 | L | A | 0.9959 | |
82 | E | A | -0.9244 | |
83 | D | A | -1.1376 | |
84 | L | A | 1.2404 | |
85 | L | A | 1.9830 | |
86 | M | A | 1.1923 | |
87 | G | A | -0.0455 | |
88 | P | A | -0.7394 | |
89 | G | A | -0.8370 | |
90 | P | A | -0.7823 | |
91 | G | A | -0.8299 | |
92 | T | A | -0.4103 | |
93 | P | A | -0.1757 | |
94 | T | A | 0.0592 | |
95 | L | A | 0.6417 | |
96 | H | A | -0.7867 | |
97 | E | A | -1.6535 | |
98 | Y | A | -0.3502 | |
99 | M | A | -0.5924 | |
100 | L | A | -0.1684 | |
101 | D | A | -1.0230 | |
102 | L | A | -0.4410 | |
103 | Q | A | -1.8377 | |
104 | P | A | -1.9812 | |
105 | E | A | -2.4289 | |
106 | T | A | -1.8261 | |
107 | G | A | -1.5800 | |
108 | P | A | -0.8398 | |
109 | G | A | -0.7771 | |
110 | P | A | -0.6035 | |
111 | G | A | -0.5230 | |
112 | L | A | -0.0585 | |
113 | Q | A | -1.5982 | |
114 | D | A | -1.4249 | |
115 | I | A | 0.9169 | |
116 | V | A | 1.4975 | |
117 | L | A | 1.8353 | |
118 | H | A | 0.2531 | |
119 | L | A | 0.5794 | |
120 | E | A | -1.6623 | |
121 | P | A | -2.1845 | |
122 | Q | A | -2.4100 | |
123 | N | A | -2.4715 | |
124 | E | A | -1.8687 | |
125 | I | A | 0.3817 | |
126 | P | A | -0.3077 | |
127 | G | A | -0.6373 | |
128 | P | A | -0.6550 | |
129 | G | A | -0.7654 | |
130 | P | A | -0.2027 | |
131 | G | A | 0.1850 | |
132 | V | A | 1.8000 | |
133 | Y | A | 1.7067 | |
134 | D | A | 0.4893 | |
135 | F | A | 2.0313 | |
136 | A | A | 1.0069 | |
137 | F | A | 1.3352 | |
138 | R | A | -1.0702 | |
139 | D | A | -1.3478 | |
140 | L | A | 1.0376 | |
141 | A | A | 0.3380 | |
142 | A | A | 0.6500 | |
143 | Y | A | 1.1645 | |
144 | R | A | -0.3637 | |
145 | F | A | 1.1333 | |
146 | H | A | -0.4721 | |
147 | N | A | -0.6020 | |
148 | I | A | 1.0944 | |
149 | A | A | 0.1164 | |
150 | G | A | -0.5398 | |
151 | H | A | -0.6677 | |
152 | Y | A | 0.5776 | |
153 | A | A | 0.5932 | |
154 | A | A | 0.8602 | |
155 | Y | A | 2.1204 | |
156 | C | A | 1.8385 | |
157 | Y | A | 1.9561 | |
158 | S | A | 0.7803 | |
159 | L | A | 0.6114 | |
160 | Y | A | 0.3006 | |
161 | G | A | 0.1039 | |
162 | T | A | 0.3021 | |
163 | T | A | 0.4334 | |
164 | L | A | 0.4148 | |
165 | A | A | 0.2941 | |
166 | A | A | 0.6096 | |
167 | Y | A | 0.9248 | |
168 | K | A | -0.4095 | |
169 | T | A | 0.5141 | |
170 | V | A | 1.9646 | |
171 | L | A | 1.4924 | |
172 | E | A | 0.0729 | |
173 | L | A | 1.4320 | |
174 | T | A | 0.6450 | |
175 | E | A | -0.0635 | |
176 | V | A | 1.1754 | |
177 | A | A | 0.1510 | |
178 | A | A | -0.0808 | |
179 | Y | A | -0.0387 | |
180 | A | A | -0.7740 | |
181 | E | A | -2.4583 | |
182 | K | A | -2.5665 | |
183 | L | A | -1.7539 | |
184 | R | A | -3.5758 | |
185 | H | A | -3.0698 | |
186 | L | A | -1.9199 | |
187 | N | A | -3.6550 | |
188 | E | A | -4.2359 | |
189 | K | A | -4.0152 | |
190 | R | A | -3.7285 | |
191 | R | A | -3.1702 | |
192 | F | A | -0.6977 | |
193 | H | A | -1.5020 | |
194 | N | A | -1.8396 | |
195 | G | A | -1.3563 | |
196 | P | A | -1.2350 | |
197 | G | A | -0.9968 | |
198 | P | A | -1.0640 | |
199 | G | A | -0.8675 | |
200 | L | A | -0.5798 | |
201 | D | A | -2.5544 | |
202 | K | A | -3.4583 | |
203 | K | A | -3.0811 | |
204 | Q | A | -2.5224 | |
205 | R | A | -1.5326 | |
206 | F | A | 0.0308 | |
207 | H | A | -0.1117 | |
208 | N | A | 0.1243 | |
209 | I | A | 0.4321 | |
210 | R | A | -1.5821 | |
211 | G | A | -1.6206 | |
212 | R | A | -1.9521 | |
213 | W | A | -0.3795 | |
214 | T | A | -0.3623 | |
215 | G | A | -0.8570 | |
216 | P | A | -1.0352 | |
217 | G | A | -1.2340 | |
218 | P | A | -1.1812 | |
219 | G | A | -1.9759 | |
220 | N | A | -2.4339 | |
221 | P | A | -2.0278 | |
222 | A | A | -2.0631 | |
223 | E | A | -3.3618 | |
224 | K | A | -3.2131 | |
225 | L | A | -1.9226 | |
226 | R | A | -3.7225 | |
227 | H | A | -3.7384 | |
228 | L | A | -2.9312 | |
229 | N | A | -3.8148 | |
230 | E | A | -4.3660 | |
231 | K | A | -4.1854 | |
232 | R | A | -3.9795 | |
233 | R | A | -3.1463 | |
234 | F | A | -0.7983 | |
235 | G | A | -1.0170 | |
236 | P | A | -0.9714 | |
237 | G | A | -0.6883 | |
238 | P | A | -1.0656 | |
239 | G | A | -0.9978 | |
240 | S | A | -0.8569 | |
241 | K | A | -1.2532 | |
242 | I | A | 0.4919 | |
243 | S | A | -0.9403 | |
244 | E | A | -1.6135 | |
245 | Y | A | 0.2298 | |
246 | R | A | -0.8571 | |
247 | H | A | -0.6175 | |
248 | Y | A | 1.2192 | |
249 | C | A | 1.7467 | |
250 | Y | A | 2.0572 | |
251 | S | A | 1.4532 | |
252 | L | A | 2.5096 | |
253 | Y | A | 2.0584 | |
254 | G | A | 0.4438 | |
255 | G | A | -0.3884 | |
256 | P | A | -0.8065 | |
257 | G | A | -1.0110 | |
258 | P | A | -0.8236 | |
259 | G | A | -0.7415 |