| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPSSFRNYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTRRENFSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:59)
[INFO] Main: Simulation completed successfully. (00:02:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.5234 | |
| 2 | S | A | 0.1083 | |
| 3 | D | A | -0.5738 | |
| 4 | V | A | -0.6302 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.0656 | |
| 7 | D | A | -3.3109 | |
| 8 | L | A | -2.1062 | |
| 9 | E | A | -2.0140 | |
| 10 | V | A | 0.1421 | |
| 11 | V | A | 1.5641 | |
| 12 | A | A | 0.9006 | |
| 13 | A | A | 0.3223 | |
| 14 | T | A | -0.5258 | |
| 15 | P | A | -1.0916 | |
| 16 | T | A | -0.9765 | |
| 17 | S | A | -0.5271 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7497 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1019 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2363 | |
| 24 | A | A | -2.1038 | |
| 25 | P | A | -0.9718 | |
| 26 | S | A | -0.7709 | |
| 27 | S | A | -0.6899 | |
| 28 | F | A | 0.0000 | |
| 29 | R | A | -2.5479 | |
| 30 | N | A | -1.9645 | |
| 31 | Y | A | -1.1098 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.4581 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.4509 | |
| 36 | Y | A | -0.2339 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.7285 | |
| 39 | T | A | -1.4350 | |
| 40 | G | A | -1.3198 | |
| 41 | G | A | -1.4849 | |
| 42 | N | A | -1.5462 | |
| 43 | S | A | -0.8643 | |
| 44 | P | A | -0.2844 | |
| 45 | V | A | 0.5066 | |
| 46 | Q | A | -0.7054 | |
| 47 | E | A | -1.4159 | |
| 48 | F | A | -0.5675 | |
| 49 | T | A | -0.2913 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.1151 | |
| 52 | G | A | -1.4931 | |
| 53 | S | A | -1.6035 | |
| 54 | K | A | -2.2607 | |
| 55 | S | A | -1.5437 | |
| 56 | T | A | -0.7624 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2381 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6597 | |
| 61 | G | A | -1.0292 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.4059 | |
| 64 | P | A | -1.6598 | |
| 65 | G | A | -1.3997 | |
| 66 | V | A | -1.5919 | |
| 67 | D | A | -2.5746 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.9008 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.3382 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.0214 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | T | A | -2.5246 | |
| 77 | R | A | -3.6773 | |
| 78 | R | A | -3.8291 | |
| 79 | E | A | -3.5184 | |
| 80 | N | A | -2.4885 | |
| 81 | F | A | -0.3302 | |
| 82 | S | A | -0.5518 | |
| 83 | K | A | -1.4344 | |
| 84 | P | A | -0.6511 | |
| 85 | I | A | -0.8610 | |
| 86 | S | A | -0.8652 | |
| 87 | I | A | -0.7379 | |
| 88 | N | A | -1.8417 | |
| 89 | Y | A | -1.5907 | |
| 90 | R | A | -2.7045 | |
| 91 | T | A | -1.6938 |