| Chain sequence(s) |
B: MVDVSAVDDSKDKELREKVRFYGRIVENEPELSEEALKATAERAKELAKEAGAEDVVIEVGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:38)
[INFO] Main: Simulation completed successfully. (00:03:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | -0.8249 | |
| 2 | V | B | 0.0000 | |
| 3 | D | B | -0.4708 | |
| 4 | V | B | -0.3985 | |
| 5 | S | B | -0.5044 | |
| 6 | A | B | -1.3341 | |
| 7 | V | B | 0.0000 | |
| 8 | D | B | -3.1180 | |
| 9 | D | B | -3.3523 | |
| 10 | S | B | -2.5875 | |
| 11 | K | B | -3.7798 | |
| 12 | D | B | -4.5690 | |
| 13 | K | B | -4.7022 | |
| 14 | E | B | -4.0814 | |
| 15 | L | B | -3.4186 | |
| 16 | R | B | -3.6435 | |
| 17 | E | B | -2.9864 | |
| 18 | K | B | -2.0149 | |
| 19 | V | B | 0.0000 | |
| 20 | R | B | -0.8767 | |
| 21 | F | B | 0.3834 | |
| 22 | Y | B | -0.8296 | |
| 23 | G | B | 0.0000 | |
| 24 | R | B | -2.1847 | |
| 25 | I | B | -1.2364 | |
| 26 | V | B | 0.0000 | |
| 27 | E | B | -2.9643 | |
| 28 | N | B | -3.1816 | |
| 29 | E | B | -2.8570 | |
| 30 | P | B | -2.2569 | |
| 31 | E | B | -2.3420 | |
| 32 | L | B | -1.7713 | |
| 33 | S | B | -2.2161 | |
| 34 | E | B | -3.3716 | |
| 35 | E | B | -3.1496 | |
| 36 | A | B | -2.2666 | |
| 37 | L | B | 0.0000 | |
| 38 | K | B | -3.4359 | |
| 39 | A | B | -2.5814 | |
| 40 | T | B | -2.2703 | |
| 41 | A | B | 0.0000 | |
| 42 | E | B | -3.6923 | |
| 43 | R | B | -3.9467 | |
| 44 | A | B | 0.0000 | |
| 45 | K | B | -3.3215 | |
| 46 | E | B | -4.1181 | |
| 47 | L | B | -3.3894 | |
| 48 | A | B | 0.0000 | |
| 49 | K | B | -4.4009 | |
| 50 | E | B | -3.7932 | |
| 51 | A | B | 0.0000 | |
| 52 | G | B | -3.1855 | |
| 53 | A | B | 0.0000 | |
| 54 | E | B | -3.4627 | |
| 55 | D | B | -2.7216 | |
| 56 | V | B | -1.4176 | |
| 57 | V | B | 0.3915 | |
| 58 | I | B | -0.6158 | |
| 59 | E | B | -1.6134 | |
| 60 | V | B | -1.5329 | |
| 61 | G | B | -1.3672 | |
| 62 | S | B | -0.7413 | |
| 63 | G | B | -1.3159 | |
| 64 | C | B | 0.1883 |