| Chain sequence(s) |
H: EVQVVESGGGLVQSGGSLRLSCTASVNILGIQVMGWYRQAPGKYPEPVASIDSDGTTKYADFVKGRFTISRDNAKNTVDLQMNNLKPEDTAVYYCAADRGLGPSDQYWGQGTQVTVSA
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1554 | |
| 2 | V | H | -1.4685 | |
| 3 | Q | H | -1.3977 | |
| 4 | V | H | 0.0000 | |
| 5 | V | H | 0.1204 | |
| 6 | E | H | -0.3803 | |
| 7 | S | H | -0.8921 | |
| 8 | G | H | -1.2768 | |
| 9 | G | H | -0.6943 | |
| 11 | G | H | 0.0645 | |
| 12 | L | H | 1.1168 | |
| 13 | V | H | -0.0244 | |
| 14 | Q | H | -1.4312 | |
| 15 | S | H | -1.8652 | |
| 16 | G | H | -1.9173 | |
| 17 | G | H | -1.3222 | |
| 18 | S | H | -1.4021 | |
| 19 | L | H | -1.0143 | |
| 20 | R | H | -2.2286 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.8564 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -0.5349 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7980 | |
| 27 | V | H | -0.5991 | |
| 28 | N | H | -1.0776 | |
| 29 | I | H | 0.0000 | |
| 30 | L | H | 0.5904 | |
| 35 | G | H | -0.3530 | |
| 36 | I | H | 0.0000 | |
| 37 | Q | H | -1.2524 | |
| 38 | V | H | -1.0231 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.2602 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.3735 | |
| 45 | A | H | -0.7870 | |
| 46 | P | H | -0.6180 | |
| 47 | G | H | -0.9029 | |
| 48 | K | H | -0.9290 | |
| 49 | Y | H | 0.4449 | |
| 50 | P | H | 0.0243 | |
| 51 | E | H | -0.2997 | |
| 52 | P | H | -0.5684 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -1.5244 | |
| 58 | S | H | -1.4308 | |
| 59 | D | H | -2.1926 | |
| 63 | G | H | -1.5851 | |
| 64 | T | H | -1.1199 | |
| 65 | T | H | -1.1354 | |
| 66 | K | H | -1.4982 | |
| 67 | Y | H | -0.8527 | |
| 68 | A | H | -1.1672 | |
| 69 | D | H | -1.9524 | |
| 70 | F | H | -1.1710 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.2480 | |
| 74 | G | H | -1.6975 | |
| 75 | R | H | -1.5069 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7646 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.7228 | |
| 80 | R | H | -1.3143 | |
| 81 | D | H | -1.7868 | |
| 82 | N | H | -1.5039 | |
| 83 | A | H | -1.3075 | |
| 84 | K | H | -2.3325 | |
| 85 | N | H | -1.5663 | |
| 86 | T | H | -1.2569 | |
| 87 | V | H | 0.0000 | |
| 88 | D | H | -1.1746 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.3487 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.9673 | |
| 93 | N | H | -2.4062 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.8484 | |
| 96 | P | H | -1.9765 | |
| 97 | E | H | -2.3488 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8530 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.1486 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.0164 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | D | H | -1.3889 | |
| 108 | R | H | -1.9411 | |
| 109 | G | H | -0.9285 | |
| 110 | L | H | 0.5232 | |
| 112 | G | H | -0.3416 | |
| 113 | P | H | -0.7522 | |
| 114 | S | H | -1.2507 | |
| 115 | D | H | -2.1691 | |
| 116 | Q | H | -1.4459 | |
| 117 | Y | H | -0.9009 | |
| 118 | W | H | 0.0444 | |
| 119 | G | H | -0.3303 | |
| 120 | Q | H | -1.1366 | |
| 121 | G | H | -0.5611 | |
| 122 | T | H | -0.6645 | |
| 123 | Q | H | -0.6976 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2071 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7439 | |
| 128 | A | H | -0.6793 |