Project name: P2A4

Status: done

Started: 2026-01-15 09:57:42
Settings
Chain sequence(s) H: EVQVVESGGGLVQSGGSLRLSCTASVNILGIQVMGWYRQAPGKYPEPVASIDSDGTTKYADFVKGRFTISRDNAKNTVDLQMNNLKPEDTAVYYCAADRGLGPSDQYWGQGTQVTVSA
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:02)
Show buried residues

Minimal score value
-2.8484
Maximal score value
1.1168
Average score
-0.7807
Total score value
-92.1198

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1554
2 V H -1.4685
3 Q H -1.3977
4 V H 0.0000
5 V H 0.1204
6 E H -0.3803
7 S H -0.8921
8 G H -1.2768
9 G H -0.6943
11 G H 0.0645
12 L H 1.1168
13 V H -0.0244
14 Q H -1.4312
15 S H -1.8652
16 G H -1.9173
17 G H -1.3222
18 S H -1.4021
19 L H -1.0143
20 R H -2.2286
21 L H 0.0000
22 S H -0.8564
23 C H 0.0000
24 T H -0.5349
25 A H 0.0000
26 S H -0.7980
27 V H -0.5991
28 N H -1.0776
29 I H 0.0000
30 L H 0.5904
35 G H -0.3530
36 I H 0.0000
37 Q H -1.2524
38 V H -1.0231
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 Y H 0.2602
43 R H 0.0000
44 Q H -0.3735
45 A H -0.7870
46 P H -0.6180
47 G H -0.9029
48 K H -0.9290
49 Y H 0.4449
50 P H 0.0243
51 E H -0.2997
52 P H -0.5684
53 V H 0.0000
54 A H 0.0000
55 S H 0.0000
56 I H 0.0000
57 D H -1.5244
58 S H -1.4308
59 D H -2.1926
63 G H -1.5851
64 T H -1.1199
65 T H -1.1354
66 K H -1.4982
67 Y H -0.8527
68 A H -1.1672
69 D H -1.9524
70 F H -1.1710
71 V H 0.0000
72 K H -2.2480
74 G H -1.6975
75 R H -1.5069
76 F H 0.0000
77 T H -0.7646
78 I H 0.0000
79 S H -0.7228
80 R H -1.3143
81 D H -1.7868
82 N H -1.5039
83 A H -1.3075
84 K H -2.3325
85 N H -1.5663
86 T H -1.2569
87 V H 0.0000
88 D H -1.1746
89 L H 0.0000
90 Q H -1.3487
91 M H 0.0000
92 N H -1.9673
93 N H -2.4062
94 L H 0.0000
95 K H -2.8484
96 P H -1.9765
97 E H -2.3488
98 D H 0.0000
99 T H -0.8530
100 A H 0.0000
101 V H -0.1486
102 Y H 0.0000
103 Y H -0.0164
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 D H -1.3889
108 R H -1.9411
109 G H -0.9285
110 L H 0.5232
112 G H -0.3416
113 P H -0.7522
114 S H -1.2507
115 D H -2.1691
116 Q H -1.4459
117 Y H -0.9009
118 W H 0.0444
119 G H -0.3303
120 Q H -1.1366
121 G H -0.5611
122 T H -0.6645
123 Q H -0.6976
124 V H 0.0000
125 T H -0.2071
126 V H 0.0000
127 S H -0.7439
128 A H -0.6793
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Laboratory of Theory of Biopolymers 2018