Project name: AF-Q9HB66-default-c70

Status: done

Started: 2021-08-04 22:48:28
Settings
Chain sequence(s) A: SLRNLWRDYKVLVVMVPLVGLIHLGWYRIS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:03)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:03)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:06)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:06)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:06)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:24)
[CRITICAL]   pyMol:    Pymol encountered an error: /bin/sh: pymol: command not found Movie         
                       creation failed.                                                            (00:00:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-2.5659
Maximal score value
3.6214
Average score
1.2911
Total score value
38.7338

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 S A -0.4416
3 L A 0.2392
4 R A -2.0443
5 N A -2.1727
6 L A -0.3499
7 W A -0.6119
8 R A -2.5659
9 D A -1.6126
10 Y A 0.4016
11 K A -0.4713
12 V A 2.2447
13 L A 2.9712
14 V A 2.3121
15 V A 2.9385
16 M A 3.4168
17 V A 3.6214
18 P A 2.6994
19 L A 3.4614
20 V A 3.0047
21 G A 2.2703
22 L A 3.3885
23 I A 2.8941
24 H A 1.9739
25 L A 2.1914
26 G A 1.9690
27 W A 2.5000
28 Y A 2.0309
29 R A 0.3002
30 I A 1.9020
32 S A 0.2727
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Laboratory of Theory of Biopolymers 2018