Project name: query_structure

Status: done

Started: 2026-03-16 23:46:17
Settings
Chain sequence(s) A: GVACGESCVYLPCFTVGCTCTSSQCFKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:11)
Show buried residues

Minimal score value
-1.4571
Maximal score value
2.8224
Average score
0.7659
Total score value
21.4457

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2166
2 V A 1.1110
3 A A 0.4225
4 C A 0.5138
5 G A -0.4152
6 E A 0.1985
7 S A 0.7661
8 C A 1.7413
9 V A 2.4177
10 Y A 2.7422
11 L A 2.8224
12 P A 1.6769
13 C A 1.9010
14 F A 2.5200
15 T A 1.5469
16 V A 1.9598
17 G A 0.3159
18 C A 0.4569
19 T A 0.2004
20 C A 0.7505
21 T A 0.0834
22 S A -0.0817
23 S A 0.4693
24 Q A -0.3462
25 C A 0.0000
26 F A 0.0322
27 K A -0.6862
28 N A -1.4571
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Laboratory of Theory of Biopolymers 2018