| Chain sequence(s) |
A: GVACGESCVYLPCFTVGCTCTSSQCFKN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2166 | |
| 2 | V | A | 1.1110 | |
| 3 | A | A | 0.4225 | |
| 4 | C | A | 0.5138 | |
| 5 | G | A | -0.4152 | |
| 6 | E | A | 0.1985 | |
| 7 | S | A | 0.7661 | |
| 8 | C | A | 1.7413 | |
| 9 | V | A | 2.4177 | |
| 10 | Y | A | 2.7422 | |
| 11 | L | A | 2.8224 | |
| 12 | P | A | 1.6769 | |
| 13 | C | A | 1.9010 | |
| 14 | F | A | 2.5200 | |
| 15 | T | A | 1.5469 | |
| 16 | V | A | 1.9598 | |
| 17 | G | A | 0.3159 | |
| 18 | C | A | 0.4569 | |
| 19 | T | A | 0.2004 | |
| 20 | C | A | 0.7505 | |
| 21 | T | A | 0.0834 | |
| 22 | S | A | -0.0817 | |
| 23 | S | A | 0.4693 | |
| 24 | Q | A | -0.3462 | |
| 25 | C | A | 0.0000 | |
| 26 | F | A | 0.0322 | |
| 27 | K | A | -0.6862 | |
| 28 | N | A | -1.4571 |