Chain sequence(s) |
A: GIGGKILSGFKDLLKGAAKALVKTVLFFSKKD
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31) [INFO] Main: Simulation completed successfully. (00:00:32) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | 0.1024 | |
2 | I | A | 1.4795 | |
3 | G | A | 0.4870 | |
4 | G | A | 0.0456 | |
5 | K | A | -0.2720 | |
6 | I | A | 1.6428 | |
7 | L | A | 1.3723 | |
8 | S | A | 0.0303 | |
9 | G | A | 0.0217 | |
10 | F | A | 0.9944 | |
11 | K | A | -1.0788 | |
12 | D | A | -1.5003 | |
13 | L | A | 0.2063 | |
14 | L | A | -0.4687 | |
15 | K | A | -2.1420 | |
16 | G | A | -1.3169 | |
17 | A | A | -0.5632 | |
18 | A | A | -0.6665 | |
19 | K | A | -1.4526 | |
20 | A | A | -0.1927 | |
21 | L | A | 1.4435 | |
22 | V | A | 1.6048 | |
23 | K | A | 0.3997 | |
24 | T | A | 1.8376 | |
25 | V | A | 2.7365 | |
26 | L | A | 2.2800 | |
27 | F | A | 1.8167 | |
28 | F | A | 1.6590 | |
29 | S | A | -0.1153 | |
30 | K | A | -1.6793 | |
31 | K | A | -2.2243 | |
32 | D | A | -2.4987 |