| Chain sequence(s) |
B: CGSGHAVPVPDSADPAAVAAYWAIDAEYGGEAAALAREARRVARETGDAVEHAELRIEAYETLIVGLEEAIEVLEAAGDEATVAELEALIASAEADIAWLEEALELAEAGELKASESPYASLPA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:22)
[INFO] Main: Simulation completed successfully. (00:02:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | B | 0.3674 | |
| 2 | G | B | -0.5639 | |
| 3 | S | B | -0.7560 | |
| 4 | G | B | -0.7309 | |
| 5 | H | B | -0.6286 | |
| 6 | A | B | 0.1572 | |
| 7 | V | B | 0.8781 | |
| 8 | P | B | 0.0000 | |
| 9 | V | B | 1.2744 | |
| 10 | P | B | 0.0000 | |
| 11 | D | B | -1.7309 | |
| 12 | S | B | -1.4449 | |
| 13 | A | B | -0.8756 | |
| 14 | D | B | -1.1980 | |
| 15 | P | B | -0.7047 | |
| 16 | A | B | -0.1313 | |
| 17 | A | B | 0.0000 | |
| 18 | V | B | 0.2048 | |
| 19 | A | B | 0.2553 | |
| 20 | A | B | 0.2822 | |
| 21 | Y | B | 0.0000 | |
| 22 | W | B | 0.5177 | |
| 23 | A | B | -0.1148 | |
| 24 | I | B | -0.5686 | |
| 25 | D | B | -0.9665 | |
| 26 | A | B | -1.2659 | |
| 27 | E | B | -2.2690 | |
| 28 | Y | B | -1.4408 | |
| 29 | G | B | -0.9070 | |
| 30 | G | B | -1.7669 | |
| 31 | E | B | -2.5195 | |
| 32 | A | B | 0.0000 | |
| 33 | A | B | -1.0509 | |
| 34 | A | B | -1.4433 | |
| 35 | L | B | -1.7874 | |
| 36 | A | B | -1.9334 | |
| 37 | R | B | -2.9934 | |
| 38 | E | B | -2.4788 | |
| 39 | A | B | 0.0000 | |
| 40 | R | B | -3.6240 | |
| 41 | R | B | -3.8395 | |
| 42 | V | B | 0.0000 | |
| 43 | A | B | 0.0000 | |
| 44 | R | B | -3.8098 | |
| 45 | E | B | -3.6151 | |
| 46 | T | B | -2.3460 | |
| 47 | G | B | -2.2958 | |
| 48 | D | B | -1.7515 | |
| 49 | A | B | -0.8198 | |
| 50 | V | B | -1.1511 | |
| 51 | E | B | -1.8205 | |
| 52 | H | B | 0.0000 | |
| 53 | A | B | 0.0000 | |
| 54 | E | B | -2.4543 | |
| 55 | L | B | -2.0657 | |
| 56 | R | B | -1.9262 | |
| 57 | I | B | -2.1537 | |
| 58 | E | B | -2.3178 | |
| 59 | A | B | 0.0000 | |
| 60 | Y | B | -1.3502 | |
| 61 | E | B | -1.8836 | |
| 62 | T | B | -1.0602 | |
| 63 | L | B | -0.5717 | |
| 64 | I | B | -0.6599 | |
| 65 | V | B | 0.3905 | |
| 66 | G | B | 0.0000 | |
| 67 | L | B | 0.0000 | |
| 68 | E | B | -2.2010 | |
| 69 | E | B | -1.9656 | |
| 70 | A | B | 0.0000 | |
| 71 | I | B | -2.5226 | |
| 72 | E | B | -2.9206 | |
| 73 | V | B | -1.4467 | |
| 74 | L | B | 0.0000 | |
| 75 | E | B | -2.9200 | |
| 76 | A | B | -1.6050 | |
| 77 | A | B | -1.4018 | |
| 78 | G | B | -2.0989 | |
| 79 | D | B | 0.0000 | |
| 80 | E | B | -2.7651 | |
| 81 | A | B | -1.6105 | |
| 82 | T | B | 0.0000 | |
| 83 | V | B | 0.0000 | |
| 84 | A | B | -1.8216 | |
| 85 | E | B | -1.7246 | |
| 86 | L | B | 0.0000 | |
| 87 | E | B | -2.2635 | |
| 88 | A | B | -1.2908 | |
| 89 | L | B | -0.5608 | |
| 90 | I | B | -1.2210 | |
| 91 | A | B | -1.1218 | |
| 92 | S | B | -0.9773 | |
| 93 | A | B | 0.0000 | |
| 94 | E | B | -2.0882 | |
| 95 | A | B | -1.2782 | |
| 96 | D | B | -1.6933 | |
| 97 | I | B | -2.0303 | |
| 98 | A | B | -1.3391 | |
| 99 | W | B | -1.1385 | |
| 100 | L | B | 0.0000 | |
| 101 | E | B | -2.7537 | |
| 102 | E | B | -3.1184 | |
| 103 | A | B | 0.0000 | |
| 104 | L | B | -2.5577 | |
| 105 | E | B | -3.3422 | |
| 106 | L | B | -2.7022 | |
| 107 | A | B | -2.3823 | |
| 108 | E | B | -2.7512 | |
| 109 | A | B | -1.8960 | |
| 110 | G | B | -2.1585 | |
| 111 | E | B | -2.7974 | |
| 112 | L | B | -2.3225 | |
| 113 | K | B | -2.2695 | |
| 114 | A | B | -1.1011 | |
| 115 | S | B | -0.9116 | |
| 116 | E | B | -1.4225 | |
| 117 | S | B | -0.4227 | |
| 118 | P | B | 0.0000 | |
| 119 | Y | B | 0.1543 | |
| 120 | A | B | 0.2135 | |
| 121 | S | B | 0.0578 | |
| 122 | L | B | -0.2692 | |
| 123 | P | B | -0.2639 | |
| 124 | A | B | 0.0471 |