| Chain sequence(s) |
A: IVVYTDREVHGAVGSRVTLHHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | DV105A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 1.56102 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:01:56)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:58)
[INFO] Main: Simulation completed successfully. (00:02:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 1.9328 | |
| 2 | V | A | 1.8823 | |
| 3 | V | A | 1.0332 | |
| 4 | Y | A | 0.3211 | |
| 5 | T | A | -1.5362 | |
| 6 | D | A | -3.2763 | |
| 7 | R | A | -3.6778 | |
| 8 | E | A | -3.1663 | |
| 9 | V | A | -1.6110 | |
| 10 | H | A | -0.6175 | |
| 11 | G | A | 0.0000 | |
| 12 | A | A | -0.8372 | |
| 13 | V | A | -1.1203 | |
| 14 | G | A | -1.7462 | |
| 15 | S | A | -1.8810 | |
| 16 | R | A | -2.5283 | |
| 17 | V | A | -1.1506 | |
| 18 | T | A | -0.7226 | |
| 19 | L | A | 0.0000 | |
| 20 | H | A | -1.0790 | |
| 21 | C | A | 0.0000 | |
| 22 | S | A | 0.4666 | |
| 23 | F | A | 0.0000 | |
| 24 | W | A | 1.9640 | |
| 25 | S | A | 1.0085 | |
| 26 | S | A | -0.1154 | |
| 27 | E | A | -0.8467 | |
| 28 | W | A | 0.3033 | |
| 29 | V | A | -0.0236 | |
| 30 | S | A | -1.2641 | |
| 31 | D | A | -2.9197 | |
| 32 | D | A | -2.6717 | |
| 33 | I | A | 0.0000 | |
| 34 | S | A | -1.4439 | |
| 35 | F | A | 0.0000 | |
| 36 | T | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | R | A | -1.1440 | |
| 39 | Y | A | 0.0000 | |
| 40 | Q | A | -2.0897 | |
| 41 | P | A | -2.0248 | |
| 42 | E | A | -2.5058 | |
| 43 | G | A | -2.1682 | |
| 44 | G | A | -2.5509 | |
| 45 | R | A | -3.2134 | |
| 46 | D | A | -2.8402 | |
| 47 | A | A | -1.4440 | |
| 48 | I | A | -0.5217 | |
| 49 | S | A | -0.4617 | |
| 50 | I | A | 0.0000 | |
| 51 | F | A | 0.0000 | |
| 52 | H | A | -0.2513 | |
| 53 | Y | A | 0.0000 | |
| 54 | A | A | -1.7117 | |
| 55 | K | A | -2.7371 | |
| 56 | G | A | -2.4047 | |
| 57 | Q | A | -1.6500 | |
| 58 | P | A | -0.4047 | |
| 59 | Y | A | 0.5504 | |
| 60 | I | A | 0.1462 | |
| 61 | D | A | -1.0239 | |
| 62 | E | A | -1.7643 | |
| 63 | V | A | 0.1693 | |
| 64 | G | A | -0.3190 | |
| 65 | T | A | -0.5751 | |
| 66 | F | A | 0.0000 | |
| 67 | K | A | -2.1273 | |
| 68 | E | A | -2.7881 | |
| 69 | R | A | -2.2798 | |
| 70 | I | A | -1.3278 | |
| 71 | Q | A | -0.5794 | |
| 72 | W | A | 0.4220 | |
| 73 | V | A | 0.5485 | |
| 74 | G | A | -0.1417 | |
| 75 | D | A | -0.7911 | |
| 76 | P | A | -1.8651 | |
| 77 | R | A | -2.1546 | |
| 78 | W | A | -0.1948 | |
| 79 | K | A | -0.7054 | |
| 80 | D | A | -0.3002 | |
| 81 | G | A | 0.0000 | |
| 82 | S | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | V | A | 0.0000 | |
| 85 | I | A | 0.0000 | |
| 86 | H | A | -2.1882 | |
| 87 | N | A | -2.5525 | |
| 88 | L | A | 0.0000 | |
| 89 | D | A | -1.2780 | |
| 90 | Y | A | 0.5942 | |
| 91 | S | A | -0.1805 | |
| 92 | D | A | 0.0000 | |
| 93 | N | A | -0.4792 | |
| 94 | G | A | 0.0000 | |
| 95 | T | A | -1.5727 | |
| 96 | F | A | 0.0000 | |
| 97 | T | A | -1.0528 | |
| 98 | C | A | 0.0000 | |
| 99 | D | A | -0.9928 | |
| 100 | V | A | 0.0000 | |
| 101 | K | A | -0.1863 | |
| 102 | N | A | -0.5212 | |
| 103 | P | A | -0.2933 | |
| 104 | P | A | 0.4692 | |
| 105 | V | A | 2.1998 | mutated: DV105A |
| 106 | I | A | 3.0778 | |
| 107 | V | A | 2.4003 | |
| 108 | G | A | 0.4720 | |
| 109 | K | A | -0.8703 | |
| 110 | T | A | -0.8165 | |
| 111 | S | A | -1.1270 | |
| 112 | Q | A | -2.2098 | |
| 113 | V | A | 0.0000 | |
| 114 | T | A | -1.8685 | |
| 115 | L | A | 0.0000 | |
| 116 | Y | A | 0.2541 | |
| 117 | V | A | 0.0000 | |
| 118 | F | A | -0.0804 | |
| 119 | E | A | -1.7699 | |
| 120 | K | A | -1.5364 | |
| 121 | V | A | 0.6116 |