| Chain sequence(s) |
A: MEVQLVEKGGGRVQAGGSLRLRCAASGITFSINTMGWYRQAPGKQRELVALISSIGDTYYADSVKGRFRIRRDNAKNTVYLRMRRLKPEDTAVYYCKRFRTAAQGTDYWGQGTRVTVSK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:15)
[INFO] Main: Simulation completed successfully. (00:02:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2747 | |
| 2 | E | A | -1.0698 | |
| 3 | V | A | 0.1699 | |
| 4 | Q | A | -0.6301 | |
| 5 | L | A | 0.0000 | |
| 6 | V | A | -0.1655 | |
| 7 | E | A | 0.0000 | |
| 8 | K | A | -2.7397 | |
| 9 | G | A | -2.4743 | |
| 10 | G | A | -2.2923 | |
| 11 | G | A | -2.0801 | |
| 12 | R | A | -2.4134 | |
| 13 | V | A | -1.7922 | |
| 14 | Q | A | -2.6148 | |
| 15 | A | A | -2.9330 | |
| 16 | G | A | -2.6357 | |
| 17 | G | A | -2.1657 | |
| 18 | S | A | -2.4506 | |
| 19 | L | A | -2.0441 | |
| 20 | R | A | -3.0569 | |
| 21 | L | A | 0.0000 | |
| 22 | R | A | -2.3308 | |
| 23 | C | A | 0.0000 | |
| 24 | A | A | -0.8817 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -0.4803 | |
| 27 | G | A | -0.1894 | |
| 28 | I | A | 0.1989 | |
| 29 | T | A | 0.3055 | |
| 30 | F | A | 0.0000 | |
| 31 | S | A | 0.3367 | |
| 32 | I | A | 1.6868 | |
| 33 | N | A | 0.0000 | |
| 34 | T | A | 0.1434 | |
| 35 | M | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | Y | A | -0.1215 | |
| 39 | R | A | 0.0000 | |
| 40 | Q | A | -1.5775 | |
| 41 | A | A | -1.6123 | |
| 42 | P | A | -1.1057 | |
| 43 | G | A | -1.5418 | |
| 44 | K | A | -2.3781 | |
| 45 | Q | A | -2.4298 | |
| 46 | R | A | -1.8658 | |
| 47 | E | A | -1.0658 | |
| 48 | L | A | 0.0533 | |
| 49 | V | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | L | A | -0.0442 | |
| 52 | I | A | 0.0000 | |
| 53 | S | A | 0.0666 | |
| 54 | S | A | 0.7965 | |
| 55 | I | A | 1.5060 | |
| 56 | G | A | -0.5702 | |
| 57 | D | A | -1.2758 | |
| 58 | T | A | -0.6656 | |
| 59 | Y | A | -0.0177 | |
| 60 | Y | A | -0.6077 | |
| 61 | A | A | -1.1299 | |
| 62 | D | A | -2.4049 | |
| 63 | S | A | -1.8376 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.6944 | |
| 66 | G | A | -2.3067 | |
| 67 | R | A | -2.6643 | |
| 68 | F | A | 0.0000 | |
| 69 | R | A | -2.4386 | |
| 70 | I | A | 0.0000 | |
| 71 | R | A | -2.5141 | |
| 72 | R | A | -1.9959 | |
| 73 | D | A | -1.9307 | |
| 74 | N | A | -1.8204 | |
| 75 | A | A | -1.4847 | |
| 76 | K | A | -2.3445 | |
| 77 | N | A | -1.7729 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | R | A | -2.7348 | |
| 83 | M | A | 0.0000 | |
| 84 | R | A | -3.6155 | |
| 85 | R | A | -3.5506 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -3.5717 | |
| 88 | P | A | -2.3732 | |
| 89 | E | A | -2.4370 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -1.4700 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.7166 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.0000 | |
| 96 | C | A | 0.0000 | |
| 97 | K | A | -0.0730 | |
| 98 | R | A | 0.0000 | |
| 99 | F | A | -0.2265 | |
| 100 | R | A | -1.0823 | |
| 101 | T | A | -0.4393 | |
| 102 | A | A | -0.4302 | |
| 103 | A | A | -0.5766 | |
| 104 | Q | A | -1.2191 | |
| 105 | G | A | -1.0712 | |
| 106 | T | A | -0.6746 | |
| 107 | D | A | -0.6118 | |
| 108 | Y | A | 0.0421 | |
| 109 | W | A | 0.1076 | |
| 110 | G | A | -0.3683 | |
| 111 | Q | A | -1.2000 | |
| 112 | G | A | -1.0949 | |
| 113 | T | A | -1.6771 | |
| 114 | R | A | -2.3637 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -1.7499 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -2.1582 | |
| 119 | K | A | -2.3664 |