Project name: query_structure

Status: done

Started: 2026-03-17 00:09:11
Settings
Chain sequence(s) A: MEVQLVEKGGGRVQAGGSLRLRCAASGITFSINTMGWYRQAPGKQRELVALISSIGDTYYADSVKGRFRIRRDNAKNTVYLRMRRLKPEDTAVYYCKRFRTAAQGTDYWGQGTRVTVSK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:15)
Show buried residues

Minimal score value
-3.6155
Maximal score value
1.6868
Average score
-0.9901
Total score value
-117.824

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.2747
2 E A -1.0698
3 V A 0.1699
4 Q A -0.6301
5 L A 0.0000
6 V A -0.1655
7 E A 0.0000
8 K A -2.7397
9 G A -2.4743
10 G A -2.2923
11 G A -2.0801
12 R A -2.4134
13 V A -1.7922
14 Q A -2.6148
15 A A -2.9330
16 G A -2.6357
17 G A -2.1657
18 S A -2.4506
19 L A -2.0441
20 R A -3.0569
21 L A 0.0000
22 R A -2.3308
23 C A 0.0000
24 A A -0.8817
25 A A 0.0000
26 S A -0.4803
27 G A -0.1894
28 I A 0.1989
29 T A 0.3055
30 F A 0.0000
31 S A 0.3367
32 I A 1.6868
33 N A 0.0000
34 T A 0.1434
35 M A 0.0000
36 G A 0.0000
37 W A 0.0000
38 Y A -0.1215
39 R A 0.0000
40 Q A -1.5775
41 A A -1.6123
42 P A -1.1057
43 G A -1.5418
44 K A -2.3781
45 Q A -2.4298
46 R A -1.8658
47 E A -1.0658
48 L A 0.0533
49 V A 0.0000
50 A A 0.0000
51 L A -0.0442
52 I A 0.0000
53 S A 0.0666
54 S A 0.7965
55 I A 1.5060
56 G A -0.5702
57 D A -1.2758
58 T A -0.6656
59 Y A -0.0177
60 Y A -0.6077
61 A A -1.1299
62 D A -2.4049
63 S A -1.8376
64 V A 0.0000
65 K A -2.6944
66 G A -2.3067
67 R A -2.6643
68 F A 0.0000
69 R A -2.4386
70 I A 0.0000
71 R A -2.5141
72 R A -1.9959
73 D A -1.9307
74 N A -1.8204
75 A A -1.4847
76 K A -2.3445
77 N A -1.7729
78 T A 0.0000
79 V A 0.0000
80 Y A 0.0000
81 L A 0.0000
82 R A -2.7348
83 M A 0.0000
84 R A -3.6155
85 R A -3.5506
86 L A 0.0000
87 K A -3.5717
88 P A -2.3732
89 E A -2.4370
90 D A 0.0000
91 T A -1.4700
92 A A 0.0000
93 V A -0.7166
94 Y A 0.0000
95 Y A 0.0000
96 C A 0.0000
97 K A -0.0730
98 R A 0.0000
99 F A -0.2265
100 R A -1.0823
101 T A -0.4393
102 A A -0.4302
103 A A -0.5766
104 Q A -1.2191
105 G A -1.0712
106 T A -0.6746
107 D A -0.6118
108 Y A 0.0421
109 W A 0.1076
110 G A -0.3683
111 Q A -1.2000
112 G A -1.0949
113 T A -1.6771
114 R A -2.3637
115 V A 0.0000
116 T A -1.7499
117 V A 0.0000
118 S A -2.1582
119 K A -2.3664
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Laboratory of Theory of Biopolymers 2018