Chain sequence(s) |
A: DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYSFGQGTKLEIK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02) [INFO] Main: Simulation completed successfully. (00:01:02) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | D | A | -1.3913 | |
2 | I | A | 0.0000 | |
3 | V | A | 1.1856 | |
4 | M | A | 0.0000 | |
5 | T | A | -0.3574 | |
6 | Q | A | 0.0000 | |
7 | S | A | -1.3139 | |
8 | P | A | -1.2717 | |
9 | D | A | -2.3484 | |
10 | S | A | -1.4736 | |
11 | L | A | -0.8839 | |
12 | A | A | -0.8718 | |
13 | V | A | 0.0000 | |
14 | S | A | -1.2467 | |
15 | L | A | -0.5504 | |
16 | G | A | -1.4799 | |
17 | E | A | -2.7132 | |
18 | R | A | -2.8248 | |
19 | A | A | 0.0000 | |
20 | T | A | -0.6214 | |
21 | I | A | 0.0000 | |
22 | N | A | -1.2422 | |
23 | C | A | 0.0000 | |
24 | K | A | -1.5989 | |
25 | S | A | 0.0000 | |
26 | S | A | -0.7773 | |
27 | Q | A | -1.3556 | |
27A | S | A | -0.6958 | |
27B | V | A | 0.0000 | |
27C | L | A | 0.3745 | |
27D | Y | A | 0.4308 | |
27E | S | A | -0.2813 | |
27F | S | A | -0.6907 | |
28 | N | A | -1.2907 | |
29 | S | A | -0.8057 | |
30 | K | A | -0.7574 | |
31 | N | A | 0.0000 | |
32 | Y | A | 0.7242 | |
33 | L | A | 0.0000 | |
34 | A | A | 0.0000 | |
35 | W | A | 0.0000 | |
36 | Y | A | 0.0440 | |
37 | Q | A | 0.0000 | |
38 | Q | A | -1.3050 | |
39 | K | A | -1.8072 | |
40 | P | A | -1.1337 | |
41 | G | A | -1.4075 | |
42 | Q | A | -2.0339 | |
43 | P | A | -1.4447 | |
44 | P | A | -1.2334 | |
45 | K | A | -1.4538 | |
46 | L | A | -0.2722 | |
47 | L | A | 0.0000 | |
48 | I | A | 0.0000 | |
49 | Y | A | 0.2420 | |
50 | W | A | 0.2007 | |
51 | A | A | 0.0000 | |
52 | S | A | -0.4193 | |
53 | T | A | -0.4033 | |
54 | R | A | -1.2229 | |
55 | E | A | -1.1211 | |
56 | S | A | -0.8249 | |
57 | G | A | -0.9777 | |
58 | V | A | -0.9207 | |
59 | P | A | -1.3173 | |
60 | D | A | -2.1226 | |
61 | R | A | -1.4616 | |
62 | F | A | 0.0000 | |
63 | S | A | -0.8313 | |
64 | G | A | -0.5676 | |
65 | S | A | -0.6533 | |
66 | G | A | -1.1064 | |
67 | S | A | -0.9417 | |
68 | G | A | -0.7919 | |
69 | T | A | -1.4602 | |
70 | D | A | -2.2555 | |
71 | F | A | 0.0000 | |
72 | T | A | -0.8525 | |
73 | L | A | 0.0000 | |
74 | T | A | -0.8148 | |
75 | I | A | 0.0000 | |
76 | S | A | -1.8076 | |
77 | S | A | -1.5526 | |
78 | L | A | 0.0000 | |
79 | Q | A | -1.4953 | |
80 | A | A | -1.0564 | |
81 | E | A | -2.0058 | |
82 | D | A | 0.0000 | |
83 | V | A | -1.0205 | |
84 | A | A | 0.0000 | |
85 | V | A | -0.7671 | |
86 | Y | A | 0.0000 | |
87 | Y | A | 0.0554 | |
88 | C | A | 0.0000 | |
89 | Q | A | 0.9291 | |
90 | Q | A | 0.0000 | |
91 | Y | A | 1.1308 | |
92 | Y | A | 0.7414 | |
93 | S | A | 0.1059 | |
94 | T | A | -0.0156 | |
95 | P | A | 0.1335 | |
96 | Y | A | 1.4908 | |
97 | S | A | 1.1277 | |
98 | F | A | 1.5007 | |
99 | G | A | 0.1698 | |
100 | Q | A | -1.3157 | |
101 | G | A | 0.0000 | |
102 | T | A | 0.0000 | |
103 | K | A | -1.6822 | |
104 | L | A | 0.0000 | |
105 | E | A | -1.4173 | |
106 | I | A | -0.9642 | |
107 | K | A | -1.5864 |