Project name: query_structure

Status: done

Started: 2026-03-16 23:26:24
Settings
Chain sequence(s) A: GLPTCGETCFKGKCYTPGCSCSYPICKKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:26)
Show buried residues

Minimal score value
-2.1635
Maximal score value
1.4617
Average score
-0.2843
Total score value
-8.2454

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.2121
2 L A 0.9664
3 P A -0.4259
4 T A -0.5708
5 C A -0.7025
6 G A -0.8749
7 E A -0.3830
8 T A 0.1755
9 C A 0.0000
10 F A 1.0869
11 K A -1.0386
12 G A -0.7199
13 K A -1.2749
14 C A -0.2564
15 Y A 0.8019
16 T A -0.1051
17 P A -0.4314
18 G A -1.1890
19 C A -1.3407
20 S A -0.7618
21 C A 0.1314
22 S A 0.6790
23 Y A 1.4617
24 P A 1.0836
25 I A 0.5805
26 C A 0.0000
27 K A -1.1366
28 K A -2.0494
29 N A -2.1635
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Laboratory of Theory of Biopolymers 2018