| Chain sequence(s) |
A: GPLDLNPEPELRSTDEFVEPTDLLYIAETDLITETGHPTKDIVVDGKVLVPQVNAYQYRVFKLTLPDPNTMPLPSADFIDRSTEILIWRLKAFKIKVFGPLGKGSYGHPNFNRFGNVDNPTEYQHETEDDTINYSFRPKLLQSFIIGDRPPTGKYTTLAPPAPGLPPGALPPLETVSTTIEHGDMADIGFGAKDYKALLPEKNDVPDIILDTKTIRVDYEGMAAEPYGRRMFTYNEKEKSSAAETFRRDGEDLLPLDDTEPPSKLYVEPPPDSPYWERPSTDIFTIPDEGEITEEDLLFNKPYFLEKTKGKNNGILWNNQLYVTVVDNSRAEIKTIKTQISTPENNVYDPSNYVTSKLYTEEYQLSLIIQLCKIPLTPEVLAELERIDPSILVNANLPFIPPVERADPYAGKKFIELDLTNKLSSDLSKSELGQLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4389 | |
| 2 | P | A | 0.0006 | |
| 3 | L | A | 0.7111 | |
| 4 | D | A | -1.1279 | |
| 5 | L | A | 0.2692 | |
| 6 | N | A | -1.5281 | |
| 7 | P | A | -2.0280 | |
| 8 | E | A | -2.9005 | |
| 9 | P | A | -2.3121 | |
| 10 | E | A | -2.5453 | |
| 11 | L | A | -1.5285 | |
| 12 | R | A | -1.7471 | |
| 13 | S | A | -1.8047 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.0804 | |
| 16 | E | A | -2.9644 | |
| 17 | F | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -2.2075 | |
| 20 | P | A | -1.5837 | |
| 21 | T | A | -1.2220 | |
| 22 | D | A | -1.6326 | |
| 23 | L | A | -0.5012 | |
| 24 | L | A | -0.1801 | |
| 25 | Y | A | -0.1400 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.0729 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3592 | |
| 31 | L | A | 0.3402 | |
| 32 | I | A | 0.0000 | |
| 33 | T | A | -0.2348 | |
| 34 | E | A | -0.6227 | |
| 35 | T | A | -0.2692 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.1272 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.4149 | |
| 40 | K | A | -1.9185 | |
| 41 | D | A | -0.5630 | |
| 42 | I | A | 1.5909 | |
| 43 | V | A | 2.3572 | |
| 44 | V | A | 1.6215 | |
| 45 | D | A | -1.0026 | |
| 46 | G | A | -0.5639 | |
| 47 | K | A | -0.2057 | |
| 48 | V | A | 2.0379 | |
| 49 | L | A | 2.6492 | |
| 50 | V | A | 1.5584 | |
| 51 | P | A | 0.1089 | |
| 52 | Q | A | -0.9079 | |
| 53 | V | A | 0.0000 | |
| 54 | N | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2228 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.7977 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.8216 | |
| 70 | T | A | -0.2788 | |
| 71 | M | A | -0.1221 | |
| 72 | P | A | -0.1471 | |
| 73 | L | A | -0.0979 | |
| 74 | P | A | -0.3541 | |
| 75 | S | A | -0.6706 | |
| 76 | A | A | -1.0059 | |
| 77 | D | A | -2.2132 | |
| 78 | F | A | -1.1763 | |
| 79 | I | A | 0.0000 | |
| 80 | D | A | -2.9632 | |
| 81 | R | A | -3.0255 | |
| 82 | S | A | -1.7372 | |
| 83 | T | A | -1.3466 | |
| 84 | E | A | -1.5152 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.6300 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.5221 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.4139 | |
| 99 | G | A | -0.4259 | |
| 100 | P | A | -0.4205 | |
| 101 | L | A | -0.3304 | |
| 102 | G | A | -0.9516 | |
| 103 | K | A | -1.7009 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.8956 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -1.0496 | |
| 108 | H | A | -1.3548 | |
| 109 | P | A | -1.3511 | |
| 110 | N | A | -2.1184 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -0.4562 | |
| 114 | F | A | -0.5256 | |
| 115 | G | A | 0.0000 | |
| 116 | N | A | -1.3013 | |
| 117 | V | A | -1.0204 | |
| 118 | D | A | -2.5885 | |
| 119 | N | A | -2.5540 | |
| 120 | P | A | -1.8726 | |
| 121 | T | A | -1.5306 | |
| 122 | E | A | -2.0380 | |
| 123 | Y | A | -0.7124 | |
| 124 | Q | A | -1.3716 | |
| 125 | H | A | -1.7919 | |
| 126 | E | A | -2.4819 | |
| 127 | T | A | -2.2274 | |
| 128 | E | A | -3.0068 | |
| 129 | D | A | -3.0271 | |
| 130 | D | A | -1.9282 | |
| 131 | T | A | -1.3361 | |
| 132 | I | A | -0.4468 | |
| 133 | N | A | -1.3325 | |
| 134 | Y | A | -0.6941 | |
| 135 | S | A | -0.6471 | |
| 136 | F | A | 0.0000 | |
| 137 | R | A | -1.0816 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | R | A | -0.5222 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.5076 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.9727 | |
| 155 | Y | A | -0.9534 | |
| 156 | T | A | -0.3621 | |
| 157 | T | A | -0.1082 | |
| 158 | L | A | 0.7532 | |
| 159 | A | A | 0.3392 | |
| 160 | P | A | -0.1815 | |
| 161 | P | A | -0.1496 | |
| 162 | A | A | -0.2877 | |
| 163 | P | A | -0.4155 | |
| 164 | G | A | -0.4116 | |
| 165 | L | A | 0.2342 | |
| 166 | P | A | -0.1416 | |
| 167 | P | A | -0.3094 | |
| 168 | G | A | -0.1867 | |
| 169 | A | A | 0.9247 | |
| 170 | L | A | 1.8221 | |
| 171 | P | A | 0.9316 | |
| 172 | P | A | 0.8446 | |
| 173 | L | A | 1.3145 | |
| 174 | E | A | -0.0639 | |
| 175 | T | A | -0.1924 | |
| 176 | V | A | 0.0122 | |
| 177 | S | A | -0.4831 | |
| 178 | T | A | -0.3153 | |
| 179 | T | A | -0.6238 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1769 | |
| 182 | H | A | -1.0341 | |
| 183 | G | A | -0.7180 | |
| 184 | D | A | -0.8321 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.6184 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4710 | |
| 190 | F | A | -0.0623 | |
| 191 | G | A | -0.5167 | |
| 192 | A | A | -0.9574 | |
| 193 | K | A | -1.3990 | |
| 194 | D | A | -1.4855 | |
| 195 | Y | A | 0.0000 | |
| 196 | K | A | -3.0074 | |
| 197 | A | A | -1.0719 | |
| 198 | L | A | -0.4876 | |
| 199 | L | A | -1.4881 | |
| 200 | P | A | -1.7950 | |
| 201 | E | A | -2.2376 | |
| 202 | K | A | -3.2134 | |
| 203 | N | A | -1.9032 | |
| 204 | D | A | -1.3049 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.8242 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -2.2074 | |
| 211 | D | A | -2.9403 | |
| 212 | T | A | -1.9308 | |
| 213 | K | A | -1.7250 | |
| 214 | T | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | R | A | -1.1046 | |
| 217 | V | A | 0.0000 | |
| 218 | D | A | -1.1459 | |
| 219 | Y | A | -1.0759 | |
| 220 | E | A | -1.9288 | |
| 221 | G | A | -1.3178 | |
| 222 | M | A | 0.0000 | |
| 223 | A | A | -1.1635 | |
| 224 | A | A | -0.7367 | |
| 225 | E | A | -0.8322 | |
| 226 | P | A | -0.7672 | |
| 227 | Y | A | 0.0000 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.5136 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.5783 | |
| 234 | Y | A | -0.1976 | |
| 235 | N | A | -0.7338 | |
| 236 | E | A | -1.3245 | |
| 237 | K | A | -2.0736 | |
| 238 | E | A | -2.3823 | |
| 239 | K | A | -2.4738 | |
| 240 | S | A | -1.5550 | |
| 241 | S | A | -0.6641 | |
| 242 | A | A | -0.2810 | |
| 243 | A | A | -0.6368 | |
| 244 | E | A | -1.1559 | |
| 245 | T | A | -0.6195 | |
| 246 | F | A | 0.0000 | |
| 247 | R | A | -0.2225 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.9339 | |
| 250 | G | A | -1.7122 | |
| 251 | E | A | -2.1108 | |
| 252 | D | A | -0.8389 | |
| 253 | L | A | 1.6347 | |
| 254 | L | A | 1.2988 | |
| 255 | P | A | 0.2340 | |
| 256 | L | A | 0.5957 | |
| 257 | D | A | -2.0386 | |
| 258 | D | A | -2.5683 | |
| 259 | T | A | -2.1334 | |
| 260 | E | A | -2.8087 | |
| 261 | P | A | -1.7541 | |
| 262 | P | A | -0.7172 | |
| 263 | S | A | -0.6368 | |
| 264 | K | A | -0.9744 | |
| 265 | L | A | 0.9633 | |
| 266 | Y | A | 1.0242 | |
| 267 | V | A | 1.0827 | |
| 268 | E | A | -0.2906 | |
| 269 | P | A | -0.6271 | |
| 270 | P | A | -0.7848 | |
| 271 | P | A | -1.3432 | |
| 272 | D | A | -1.8908 | |
| 273 | S | A | -0.9521 | |
| 274 | P | A | -0.5567 | |
| 275 | Y | A | -0.0974 | |
| 276 | W | A | -0.6931 | |
| 277 | E | A | -2.2030 | |
| 278 | R | A | -2.1712 | |
| 279 | P | A | -1.9062 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.6155 | |
| 282 | D | A | -0.9088 | |
| 283 | I | A | 1.1842 | |
| 284 | F | A | 0.6323 | |
| 285 | T | A | 0.1245 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.0886 | |
| 289 | E | A | 0.0000 | |
| 290 | G | A | -1.4723 | |
| 291 | E | A | -2.1301 | |
| 292 | I | A | -1.7277 | |
| 293 | T | A | -2.0310 | |
| 294 | E | A | -2.8678 | |
| 295 | E | A | -3.1000 | |
| 296 | D | A | -2.5949 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.1224 | |
| 301 | K | A | -1.2594 | |
| 302 | P | A | -0.5558 | |
| 303 | Y | A | -0.1170 | |
| 304 | F | A | -0.3632 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5824 | |
| 307 | K | A | -3.2397 | |
| 308 | T | A | 0.0000 | |
| 309 | K | A | -2.2515 | |
| 310 | G | A | -1.6349 | |
| 311 | K | A | -1.7739 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.7537 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | N | A | -0.8160 | |
| 319 | N | A | -0.7509 | |
| 320 | Q | A | -0.7604 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | -0.7053 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.2776 | |
| 333 | I | A | -1.5361 | |
| 334 | K | A | -1.8574 | |
| 335 | T | A | -1.1475 | |
| 336 | I | A | -0.1266 | |
| 337 | K | A | -1.0909 | |
| 338 | T | A | -0.3692 | |
| 339 | Q | A | -0.4544 | |
| 340 | I | A | 1.3760 | |
| 341 | S | A | 0.2092 | |
| 342 | T | A | -0.5340 | |
| 343 | P | A | -1.0512 | |
| 344 | E | A | -2.3124 | |
| 345 | N | A | -2.0336 | |
| 346 | N | A | -1.4241 | |
| 347 | V | A | 0.6141 | |
| 348 | Y | A | 0.9080 | |
| 349 | D | A | -0.3746 | |
| 350 | P | A | -0.5745 | |
| 351 | S | A | -0.0864 | |
| 352 | N | A | -0.1541 | |
| 353 | Y | A | 0.2762 | |
| 354 | V | A | 0.5495 | |
| 355 | T | A | -0.4578 | |
| 356 | S | A | -0.7277 | |
| 357 | K | A | -1.4245 | |
| 358 | L | A | -0.7852 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.6471 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.1954 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.4644 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | -0.3427 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -1.0309 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -1.0027 | |
| 376 | L | A | -0.5394 | |
| 377 | T | A | -0.6576 | |
| 378 | P | A | -1.0081 | |
| 379 | E | A | -1.8217 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -0.7730 | |
| 382 | A | A | -1.1334 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -1.6384 | |
| 386 | R | A | -1.4532 | |
| 387 | I | A | -0.8011 | |
| 388 | D | A | -0.8465 | |
| 389 | P | A | -0.9589 | |
| 390 | S | A | 0.0000 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.6742 | |
| 394 | N | A | -1.7143 | |
| 395 | A | A | -1.2123 | |
| 396 | N | A | -1.1490 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.1848 | |
| 399 | F | A | 1.7646 | |
| 400 | I | A | 1.0224 | |
| 401 | P | A | 0.3766 | |
| 402 | P | A | -0.2550 | |
| 403 | V | A | 0.0574 | |
| 404 | E | A | -2.1529 | |
| 405 | R | A | -2.6376 | |
| 406 | A | A | -1.6127 | |
| 407 | D | A | -1.8592 | |
| 408 | P | A | -1.0799 | |
| 409 | Y | A | -0.9725 | |
| 410 | A | A | -1.0228 | |
| 411 | G | A | -1.3757 | |
| 412 | K | A | -2.0288 | |
| 413 | K | A | -2.5007 | |
| 414 | F | A | -1.4179 | |
| 415 | I | A | -1.1408 | |
| 416 | E | A | -2.2086 | |
| 417 | L | A | -1.7137 | |
| 418 | D | A | -2.4618 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.3841 | |
| 421 | N | A | -1.8210 | |
| 422 | K | A | -1.7410 | |
| 423 | L | A | -0.6463 | |
| 424 | S | A | -0.8620 | |
| 425 | S | A | -0.5855 | |
| 426 | D | A | -1.3733 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.5100 | |
| 429 | K | A | -2.5394 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.0440 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | Q | A | -1.6676 | |
| 435 | L | A | -0.5567 | |
| 436 | Y | A | -0.2346 | |
| 437 | L | A | 0.2392 | |
| 438 | N | A | -1.4259 | |
| 439 | R | A | -1.8346 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine