| Chain sequence(s) |
A: GPSQGQLVESGGGLVQPGGSLRLSSAASGFTLDYYAIGWFRQAPGKEREGVSSISNSGGSTKYADSVKGRFTISRDKAKNTVYLQMNSLKPEDTGVYYSAADRGYSEYDLPSDLVIYGMDYWGKGTPVTVSA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35)
[INFO] Main: Simulation completed successfully. (00:01:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.8296 | |
| 2 | P | A | -0.9651 | |
| 3 | S | A | -1.3449 | |
| 4 | Q | A | -1.7698 | |
| 5 | G | A | -1.1644 | |
| 6 | Q | A | -1.4275 | |
| 7 | L | A | 0.0000 | |
| 8 | V | A | 0.6578 | |
| 9 | E | A | 0.0000 | |
| 10 | S | A | -0.4249 | |
| 11 | G | A | -1.1511 | |
| 12 | G | A | -0.4975 | |
| 13 | G | A | 0.2392 | |
| 14 | L | A | 1.2048 | |
| 15 | V | A | 0.0480 | |
| 16 | Q | A | -1.2254 | |
| 17 | P | A | -1.5366 | |
| 18 | G | A | -1.4702 | |
| 19 | G | A | -1.0391 | |
| 20 | S | A | -1.3069 | |
| 21 | L | A | -1.1269 | |
| 22 | R | A | -2.3492 | |
| 23 | L | A | 0.0000 | |
| 24 | S | A | -0.4917 | |
| 25 | S | A | 0.0000 | |
| 26 | A | A | -0.2049 | |
| 27 | A | A | -0.2993 | |
| 28 | S | A | -0.6678 | |
| 29 | G | A | -1.0692 | |
| 30 | F | A | -0.3028 | |
| 31 | T | A | -0.3347 | |
| 32 | L | A | 0.0000 | |
| 33 | D | A | -0.5364 | |
| 34 | Y | A | 0.6690 | |
| 35 | Y | A | 0.0000 | |
| 36 | A | A | -0.2580 | |
| 37 | I | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | W | A | 0.0000 | |
| 40 | F | A | 0.0000 | |
| 41 | R | A | 0.0000 | |
| 42 | Q | A | -1.9410 | |
| 43 | A | A | -1.8013 | |
| 44 | P | A | -1.3160 | |
| 45 | G | A | -1.7995 | |
| 46 | K | A | -2.9555 | |
| 47 | E | A | -3.5072 | |
| 48 | R | A | -3.0160 | |
| 49 | E | A | -1.7659 | |
| 50 | G | A | -1.1711 | |
| 51 | V | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | S | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | S | A | -0.7326 | |
| 56 | N | A | -0.8453 | |
| 57 | S | A | -0.9804 | |
| 58 | G | A | -1.0793 | |
| 59 | G | A | -0.9806 | |
| 60 | S | A | -1.3390 | |
| 61 | T | A | -1.1022 | |
| 62 | K | A | -2.2859 | |
| 63 | Y | A | -1.7266 | |
| 64 | A | A | -1.7881 | |
| 65 | D | A | -2.6762 | |
| 66 | S | A | -1.8678 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -2.8614 | |
| 69 | G | A | -1.8641 | |
| 70 | R | A | -1.7372 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -1.2685 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.7436 | |
| 75 | R | A | -1.4640 | |
| 76 | D | A | -2.2161 | |
| 77 | K | A | -2.8529 | |
| 78 | A | A | -1.9555 | |
| 79 | K | A | -2.5801 | |
| 80 | N | A | -1.9618 | |
| 81 | T | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | Y | A | -0.7677 | |
| 84 | L | A | 0.0000 | |
| 85 | Q | A | -1.7171 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -2.0110 | |
| 88 | S | A | -1.4585 | |
| 89 | L | A | 0.0000 | |
| 90 | K | A | -2.3471 | |
| 91 | P | A | -1.7628 | |
| 92 | E | A | -2.2897 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -0.7223 | |
| 95 | G | A | 0.0000 | |
| 96 | V | A | -0.3048 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | -0.2770 | |
| 99 | S | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | D | A | -1.1946 | |
| 103 | R | A | -1.8137 | |
| 104 | G | A | -0.3813 | |
| 105 | Y | A | 0.8247 | |
| 106 | S | A | -0.4112 | |
| 107 | E | A | -1.2796 | |
| 108 | Y | A | 0.2902 | |
| 109 | D | A | -0.9545 | |
| 110 | L | A | 0.8881 | |
| 111 | P | A | 0.0517 | |
| 112 | S | A | -0.4937 | |
| 113 | D | A | -0.7851 | |
| 114 | L | A | 1.2248 | |
| 115 | V | A | 0.9150 | |
| 116 | I | A | 0.9254 | |
| 117 | Y | A | 1.2261 | |
| 118 | G | A | -0.2535 | |
| 119 | M | A | 0.0000 | |
| 120 | D | A | -2.0593 | |
| 121 | Y | A | -1.0707 | |
| 122 | W | A | -0.1988 | |
| 123 | G | A | -0.3642 | |
| 124 | K | A | -1.3721 | |
| 125 | G | A | 0.0000 | |
| 126 | T | A | 0.0000 | |
| 127 | P | A | -0.0737 | |
| 128 | V | A | 0.0000 | |
| 129 | T | A | -0.0169 | |
| 130 | V | A | 0.0000 | |
| 131 | S | A | -0.5207 | |
| 132 | A | A | -0.6187 |