| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDPPRCRRARYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTSMPRLGIPRKSISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.3051 | |
| 2 | S | A | -0.0417 | |
| 3 | D | A | -1.2869 | |
| 4 | V | A | -0.9295 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.4430 | |
| 7 | D | A | -2.8671 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9662 | |
| 10 | V | A | 0.0612 | |
| 11 | V | A | 1.5082 | |
| 12 | A | A | 0.8693 | |
| 13 | A | A | 0.2900 | |
| 14 | T | A | -0.5522 | |
| 15 | P | A | -1.1596 | |
| 16 | T | A | -1.0075 | |
| 17 | S | A | -0.5512 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.6981 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9069 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.4865 | |
| 24 | P | A | -2.2877 | |
| 25 | P | A | 0.0000 | |
| 26 | R | A | -2.5987 | |
| 27 | C | A | -2.1020 | |
| 28 | R | A | -3.5804 | |
| 29 | R | A | -3.4217 | |
| 30 | A | A | -2.3548 | |
| 31 | R | A | -2.3996 | |
| 32 | Y | A | -1.0922 | |
| 33 | Y | A | 0.0000 | |
| 34 | R | A | -0.6047 | |
| 35 | I | A | 0.0000 | |
| 36 | T | A | 0.0000 | |
| 37 | Y | A | -0.2337 | |
| 38 | G | A | 0.0000 | |
| 39 | E | A | -1.4483 | |
| 40 | T | A | -1.1836 | |
| 41 | G | A | -1.2091 | |
| 42 | G | A | -1.3067 | |
| 43 | N | A | -1.5160 | |
| 44 | S | A | -0.8282 | |
| 45 | P | A | -0.2992 | |
| 46 | V | A | 0.4791 | |
| 47 | Q | A | -0.7734 | |
| 48 | E | A | -1.6345 | |
| 49 | F | A | -0.7175 | |
| 50 | T | A | -0.2891 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.0815 | |
| 53 | G | A | 0.0000 | |
| 54 | S | A | -1.5876 | |
| 55 | K | A | -1.9377 | |
| 56 | S | A | -1.2695 | |
| 57 | T | A | -0.6727 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2751 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6680 | |
| 62 | G | A | -1.0348 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3604 | |
| 65 | P | A | -1.6547 | |
| 66 | G | A | -1.4185 | |
| 67 | V | A | -1.3821 | |
| 68 | D | A | -2.0039 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.7065 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.1561 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | -0.4190 | |
| 75 | A | A | 0.0000 | |
| 76 | V | A | -1.0159 | |
| 77 | T | A | -1.5715 | |
| 78 | S | A | -1.1580 | |
| 79 | M | A | -0.6840 | |
| 80 | P | A | -0.8398 | |
| 81 | R | A | -1.2249 | |
| 82 | L | A | 0.4744 | |
| 83 | G | A | -0.2698 | |
| 84 | I | A | -0.0645 | |
| 85 | P | A | -0.9400 | |
| 86 | R | A | -2.0996 | |
| 87 | K | A | -1.4420 | |
| 88 | S | A | -0.8387 | |
| 89 | I | A | -0.2852 | |
| 90 | S | A | -0.2616 | |
| 91 | I | A | -0.4932 | |
| 92 | N | A | -1.6893 | |
| 93 | Y | A | -1.4067 | |
| 94 | R | A | -2.4964 | |
| 95 | T | A | -1.5109 |