Project name: query_structure

Status: done

Started: 2026-03-16 21:41:21
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFAIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSPPLIARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:48)
Show buried residues

Minimal score value
-3.1026
Maximal score value
1.1863
Average score
-0.698
Total score value
-62.8241

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0727
2 L A 0.4782
3 P A -0.1384
4 A A -0.4946
5 P A 0.0000
6 K A -1.8735
7 N A -1.3481
8 L A 0.0070
9 V A 0.9558
10 V A 0.0726
11 S A -0.5780
12 R A -2.0012
13 V A -1.0675
14 T A -1.8251
15 E A -3.1009
16 D A -2.8221
17 S A -2.0933
18 A A 0.0000
19 R A -1.1258
20 L A 0.0000
21 S A -0.3510
22 W A 0.0000
23 T A -1.3302
24 A A -1.4281
25 P A -1.3904
26 D A -2.2811
27 A A -1.4119
28 A A -1.1432
29 F A 0.0000
30 D A -2.4010
31 S A 0.0000
32 F A 0.0000
33 A A -0.3412
34 I A 0.0000
35 A A 0.0000
36 Y A 0.4445
37 W A -0.2659
38 E A -0.9745
39 P A -0.7470
40 G A 0.1051
41 I A 1.0924
42 G A -0.1403
43 G A -0.4845
44 E A -1.3326
45 A A -0.1821
46 I A 0.9401
47 W A 1.1589
48 L A 0.2855
49 R A -1.4010
50 V A 0.0000
51 P A -1.5393
52 G A 0.0000
53 S A -1.6530
54 E A -1.6359
55 R A -1.2118
56 S A -0.6387
57 Y A -0.8654
58 D A -1.5177
59 L A 0.0000
60 T A -1.3320
61 G A -1.5225
62 L A 0.0000
63 K A -3.1026
64 P A -2.6073
65 G A -1.9611
66 T A -2.0973
67 E A -2.3588
68 Y A 0.0000
69 K A -1.0013
70 V A 0.0000
71 W A 1.0709
72 I A 0.0000
73 H A -0.0923
74 G A 0.0000
75 V A -1.1670
76 K A -1.6302
77 G A -1.3730
78 G A -1.1115
79 A A -0.6000
80 S A -0.3176
81 S A 0.0000
82 P A 0.2551
83 P A 0.2850
84 L A 0.5596
85 I A 1.1863
86 A A 0.1408
87 R A -1.6881
88 F A 0.0000
89 T A -1.8075
90 T A -2.0282
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Laboratory of Theory of Biopolymers 2018