| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVFFYFITYGETGGNSPVQKFTVPGSKSTATISGLKPGVDYTITVYALYRSQKSGQYDYSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7740 | |
| 2 | S | A | 0.5915 | |
| 3 | D | A | -0.0286 | |
| 4 | V | A | -0.0250 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.2226 | |
| 7 | D | A | -3.4574 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1317 | |
| 10 | V | A | 0.0966 | |
| 11 | V | A | 1.5264 | |
| 12 | A | A | 0.8705 | |
| 13 | A | A | 0.2994 | |
| 14 | T | A | -0.3448 | |
| 15 | P | A | -1.0530 | |
| 16 | T | A | -0.9625 | |
| 17 | S | A | -0.5439 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.6466 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1755 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2347 | |
| 24 | A | A | -1.6265 | |
| 25 | P | A | -0.3568 | |
| 26 | A | A | 0.4326 | |
| 27 | V | A | 0.3929 | |
| 28 | T | A | 0.1707 | |
| 29 | V | A | 0.6450 | |
| 30 | F | A | 1.2638 | |
| 31 | F | A | 1.7458 | |
| 32 | Y | A | 0.0000 | |
| 33 | F | A | 0.9132 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.2959 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.8300 | |
| 39 | T | A | -1.5076 | |
| 40 | G | A | -1.3582 | |
| 41 | G | A | -1.5815 | |
| 42 | N | A | -1.6194 | |
| 43 | S | A | -0.9609 | |
| 44 | P | A | -0.4118 | |
| 45 | V | A | 0.2905 | |
| 46 | Q | A | -0.8422 | |
| 47 | K | A | -1.3514 | |
| 48 | F | A | -0.3490 | |
| 49 | T | A | 0.3958 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | 0.0964 | |
| 52 | G | A | 0.2951 | |
| 53 | S | A | -0.6576 | |
| 54 | K | A | -1.6367 | |
| 55 | S | A | -1.2303 | |
| 56 | T | A | -0.7365 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.0228 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6706 | |
| 61 | G | A | -1.0238 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3939 | |
| 64 | P | A | -1.6284 | |
| 65 | G | A | -1.3724 | |
| 66 | V | A | -1.6031 | |
| 67 | D | A | -2.6821 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.9395 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.8018 | |
| 74 | A | A | 0.0000 | |
| 75 | L | A | 1.0270 | |
| 76 | Y | A | -0.2189 | |
| 77 | R | A | -2.3076 | |
| 78 | S | A | 0.0000 | |
| 79 | Q | A | -2.8183 | |
| 80 | K | A | -2.8915 | |
| 81 | S | A | -2.2201 | |
| 82 | G | A | -2.2612 | |
| 83 | Q | A | -2.2649 | |
| 84 | Y | A | -0.7479 | |
| 85 | D | A | -1.3127 | |
| 86 | Y | A | 0.5817 | |
| 87 | S | A | 0.0000 | |
| 88 | S | A | -0.0792 | |
| 89 | P | A | -0.0280 | |
| 90 | I | A | -0.3307 | |
| 91 | S | A | -0.7412 | |
| 92 | I | A | -0.7379 | |
| 93 | N | A | -1.8752 | |
| 94 | Y | A | -1.6488 | |
| 95 | R | A | -2.7418 | |
| 96 | T | A | -1.5602 |