| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCATSGSIFSINAMGWFRQAPGKQRELVAVITSGGSTIYAESVKGRFTISRDNSKNTVYLQMSSLRPEDTAVYYCNAHVGLKVPTIQELSLGFGSWGQGTMVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:24)
[INFO] Main: Simulation completed successfully. (00:01:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1421 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.4180 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.8672 | |
| 6 | E | H | 0.1775 | |
| 7 | S | H | -0.3409 | |
| 8 | G | H | -0.7709 | |
| 9 | G | H | -0.0753 | |
| 11 | G | H | 0.6366 | |
| 12 | L | H | 1.3402 | |
| 13 | V | H | 0.0258 | |
| 14 | Q | H | -1.3236 | |
| 15 | P | H | -1.5523 | |
| 16 | G | H | -1.2833 | |
| 17 | G | H | -0.7944 | |
| 18 | S | H | -0.8299 | |
| 19 | L | H | -0.4091 | |
| 20 | R | H | -1.2284 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2711 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2582 | |
| 25 | T | H | 0.0000 | |
| 26 | S | H | -1.0214 | |
| 27 | G | H | -0.9424 | |
| 28 | S | H | -0.1049 | |
| 29 | I | H | 0.5263 | |
| 30 | F | H | 2.2502 | |
| 35 | S | H | 0.0000 | |
| 36 | I | H | 0.0000 | |
| 37 | N | H | -0.4963 | |
| 38 | A | H | -0.7233 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.4554 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.9897 | |
| 45 | A | H | -1.1247 | |
| 46 | P | H | -0.9580 | |
| 47 | G | H | -1.3288 | |
| 48 | K | H | -1.9247 | |
| 49 | Q | H | -2.1355 | |
| 50 | R | H | -1.4998 | |
| 51 | E | H | -0.7825 | |
| 52 | L | H | 0.6207 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | V | H | 1.1400 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | -0.4828 | |
| 58 | S | H | -1.0584 | |
| 59 | G | H | -0.8963 | |
| 63 | G | H | -0.7616 | |
| 64 | S | H | -0.0820 | |
| 65 | T | H | 0.8256 | |
| 66 | I | H | 1.8385 | |
| 67 | Y | H | 0.3734 | |
| 68 | A | H | -0.6494 | |
| 69 | E | H | -2.2545 | |
| 70 | S | H | -1.7420 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.3016 | |
| 74 | G | H | -1.6444 | |
| 75 | R | H | -1.2785 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.3802 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4685 | |
| 80 | R | H | -1.2571 | |
| 81 | D | H | -1.8851 | |
| 82 | N | H | -2.3872 | |
| 83 | S | H | -1.9428 | |
| 84 | K | H | -2.6435 | |
| 85 | N | H | -1.8025 | |
| 86 | T | H | -1.2265 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.3953 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7717 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -0.8005 | |
| 93 | S | H | -0.9773 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3044 | |
| 96 | P | H | -1.9286 | |
| 97 | E | H | -2.3466 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6018 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.3598 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.2893 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0317 | |
| 106 | A | H | 0.0000 | |
| 107 | H | H | -0.6228 | |
| 108 | V | H | 0.0555 | |
| 109 | G | H | 0.0000 | |
| 110 | L | H | 1.2443 | |
| 111 | K | H | 0.0000 | |
| 111A | V | H | 1.9126 | |
| 111B | P | H | 0.8061 | |
| 111C | T | H | 1.2526 | |
| 112D | I | H | 1.8190 | |
| 112C | Q | H | 0.5947 | |
| 112B | E | H | 0.7657 | |
| 112A | L | H | 1.5020 | |
| 112 | S | H | 1.0648 | |
| 113 | L | H | 1.4737 | |
| 114 | G | H | 0.2068 | |
| 115 | F | H | 0.3462 | |
| 116 | G | H | -0.5532 | |
| 117 | S | H | 0.0000 | |
| 118 | W | H | 0.0820 | |
| 119 | G | H | -0.3018 | |
| 120 | Q | H | -0.7389 | |
| 121 | G | H | -0.1185 | |
| 122 | T | H | 0.0741 | |
| 123 | M | H | 0.6644 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1453 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7686 | |
| 128 | S | H | -0.6993 |