| Chain sequence(s) |
H: EVQLVESGGGEVQPGGSLKLSCVASGTDFSINFVRWYRQRPGKQREWVAGFTANGDTNYPDSMKGRFTISRDNAKNTVYLQINSLKSEDTAVYYCYMLDNWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.7807 | |
| 2 | V | H | -0.3262 | |
| 3 | Q | H | -1.1593 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0585 | |
| 6 | E | H | -0.0618 | |
| 7 | S | H | -0.3190 | |
| 8 | G | H | -0.4544 | |
| 9 | G | H | -0.3625 | |
| 11 | G | H | -0.6569 | |
| 12 | E | H | -1.8372 | |
| 13 | V | H | -0.3366 | |
| 14 | Q | H | -1.1834 | |
| 15 | P | H | -0.6336 | |
| 16 | G | H | -0.5386 | |
| 17 | G | H | -0.3072 | |
| 18 | S | H | -0.2649 | |
| 19 | L | H | 0.0441 | |
| 20 | K | H | -1.3384 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | 0.0202 | |
| 23 | C | H | 0.0000 | |
| 24 | V | H | 0.9340 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.1465 | |
| 27 | G | H | -0.4823 | |
| 28 | T | H | -0.4262 | |
| 29 | D | H | -1.7942 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.0755 | |
| 36 | I | H | 0.4791 | |
| 37 | N | H | -1.0547 | |
| 38 | F | H | 0.1704 | |
| 39 | V | H | 0.0000 | |
| 40 | R | H | -0.2057 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.2397 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5609 | |
| 45 | R | H | -0.5787 | |
| 46 | P | H | -0.4208 | |
| 47 | G | H | -0.8110 | |
| 48 | K | H | -1.9995 | |
| 49 | Q | H | -1.6267 | |
| 50 | R | H | -0.9901 | |
| 51 | E | H | -0.3433 | |
| 52 | W | H | 0.2980 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | F | H | 0.2191 | |
| 57 | T | H | 0.0889 | |
| 58 | A | H | -0.3361 | |
| 59 | N | H | -1.3146 | |
| 63 | G | H | -0.8102 | |
| 64 | D | H | -1.8422 | |
| 65 | T | H | -0.4622 | |
| 66 | N | H | -0.7485 | |
| 67 | Y | H | 0.0556 | |
| 68 | P | H | -0.3598 | |
| 69 | D | H | -2.0225 | |
| 70 | S | H | -0.5291 | |
| 71 | M | H | 0.0000 | |
| 72 | K | H | -1.9205 | |
| 74 | G | H | -0.8410 | |
| 75 | R | H | -0.6113 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.0259 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1635 | |
| 80 | R | H | -0.2817 | |
| 81 | D | H | -0.6067 | |
| 82 | N | H | -1.3548 | |
| 83 | A | H | -0.4684 | |
| 84 | K | H | -1.7310 | |
| 85 | N | H | -0.7019 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | 0.3741 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.6447 | |
| 91 | I | H | 0.0000 | |
| 92 | N | H | -0.6866 | |
| 93 | S | H | -0.3380 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -1.5613 | |
| 96 | S | H | -0.6638 | |
| 97 | E | H | -1.8320 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.0139 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.4967 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.1244 | |
| 104 | C | H | 0.0000 | |
| 105 | Y | H | 0.1999 | |
| 106 | M | H | 0.0000 | |
| 107 | L | H | 0.6108 | |
| 116 | D | H | -1.6915 | |
| 117 | N | H | -0.6310 | |
| 118 | W | H | 0.3210 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2237 | |
| 121 | G | H | -0.3406 | |
| 122 | T | H | -0.1447 | |
| 123 | Q | H | -0.5304 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2437 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.1333 | |
| 128 | S | H | -0.2303 |