| Chain sequence(s) |
A: FTGHKTF
C: FTGHKTF B: FTGHKTF D: FTGHKTF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.0579 | |
| 2 | T | A | 0.7121 | |
| 3 | G | A | -0.3449 | |
| 4 | H | A | -1.4962 | |
| 5 | K | A | -0.7568 | |
| 6 | T | A | 0.6672 | |
| 7 | F | A | 2.5655 | |
| 1 | F | B | 1.7855 | |
| 2 | T | B | 0.6416 | |
| 3 | G | B | -0.3847 | |
| 4 | H | B | -1.4822 | |
| 5 | K | B | -0.5764 | |
| 6 | T | B | 1.0376 | |
| 7 | F | B | 3.1542 | |
| 1 | F | C | 1.7545 | |
| 2 | T | C | 0.6287 | |
| 3 | G | C | -0.7454 | |
| 4 | H | C | -2.0861 | |
| 5 | K | C | -0.9494 | |
| 6 | T | C | 0.6250 | |
| 7 | F | C | 2.7017 | |
| 1 | F | D | 2.0362 | |
| 2 | T | D | 0.4530 | |
| 3 | G | D | -0.8860 | |
| 4 | H | D | -2.1624 | |
| 5 | K | D | -1.9458 | |
| 6 | T | D | 0.0129 | |
| 7 | F | D | 2.2270 |