| Chain sequence(s) |
A: RQLLKDSFMVELVEGARKLRHVFLFTDLLLCTKLQYDCKWYIPLTDLSFQMVDEPSMMAFRVHSSRNGKSYTFLISSDYERAEWRENIREQQKKCFRSFSLTSVELQMLTNSC
C: GSVSSVPTKLEVVAATPTSSLLISWDAPAVTVVFYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDDYTITVYAEYYGMMTGSSPISINYRT B: SSVPTKLEVVAATPTSLLISWDAPAVTVVFYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAEYYGMTGSPISSINYRT D: RQLLKDSSFMVELVEGARKLRHVFLFTDLLLCTKLKQYDCCKWYIPLTDLSFQMVDEPSMAFRVHSSRNGKSYTFLISSDYERAEWRENIREQQKKCFRSFSSLTSVELQMLTNSC input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:09)
[INFO] Main: Simulation completed successfully. (00:04:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 707 | R | D | -2.3096 | |
| 708 | Q | D | -1.7918 | |
| 709 | L | D | -0.4818 | |
| 710 | L | D | -0.5092 | |
| 711 | K | D | -1.2580 | |
| 712 | D | D | -1.3249 | |
| 713 | S | D | -0.6437 | |
| 714 | F | D | 0.1508 | |
| 715 | M | D | 0.0000 | |
| 716 | V | D | 0.0000 | |
| 717 | E | D | 0.0000 | |
| 718 | L | D | -0.0802 | |
| 719 | V | D | -0.5018 | |
| 720 | E | D | -1.7409 | |
| 721 | G | D | -1.4938 | |
| 722 | A | D | -1.0184 | |
| 723 | R | D | -0.8511 | |
| 724 | K | D | -0.7535 | |
| 725 | L | D | -0.0210 | |
| 726 | R | D | 0.0000 | |
| 727 | H | D | 0.0000 | |
| 728 | V | D | 0.0000 | |
| 729 | F | D | 0.0000 | |
| 730 | L | D | 0.0000 | |
| 731 | F | D | 0.0000 | |
| 732 | T | D | -1.4867 | |
| 733 | D | D | -1.1387 | |
| 734 | L | D | 0.0000 | |
| 735 | L | D | 0.0000 | |
| 736 | L | D | 0.0000 | |
| 737 | C | D | 0.0000 | |
| 738 | T | D | 0.0000 | |
| 739 | K | D | -2.1908 | |
| 740 | L | D | -1.5452 | |
| 741 | K | D | -2.4574 | |
| 750 | Q | D | -2.1038 | |
| 751 | Y | D | -2.2360 | |
| 752 | D | D | -2.8774 | |
| 753 | C | D | -1.6602 | |
| 754 | K | D | -1.8787 | |
| 755 | W | D | -0.6764 | |
| 756 | Y | D | 0.0690 | |
| 757 | I | D | 0.0000 | |
| 758 | P | D | -0.3917 | |
| 759 | L | D | 0.0000 | |
| 760 | T | D | -0.8529 | |
| 761 | D | D | -1.2770 | |
| 762 | L | D | 0.0000 | |
| 763 | S | D | -1.0979 | |
| 764 | F | D | -0.8753 | |
| 765 | Q | D | -0.9838 | |
| 766 | M | D | -1.0741 | |
| 767 | V | D | 0.0000 | |
| 768 | D | D | -2.9656 | |
| 769 | E | D | -2.7924 | |
| 830 | P | D | -1.9040 | |
| 831 | S | D | -1.9450 | |
| 832 | M | D | -1.3850 | |
| 833 | A | D | 0.0000 | |
| 834 | F | D | 0.0000 | |
| 835 | R | D | -0.6669 | |
| 836 | V | D | 0.0000 | |
| 837 | H | D | -1.7928 | |
| 838 | S | D | 0.0000 | |
| 839 | R | D | -3.1427 | |
| 840 | N | D | -2.9462 | |
| 841 | G | D | -2.5271 | |
| 842 | K | D | -2.6154 | |
| 843 | S | D | -1.5668 | |
| 844 | Y | D | -0.2726 | |
| 845 | T | D | -0.0709 | |
| 846 | F | D | 0.0000 | |
| 847 | L | D | 0.0000 | |
| 848 | I | D | 0.0000 | |
| 849 | S | D | -0.5248 | |
| 850 | S | D | -1.0573 | |
| 851 | D | D | -1.7515 | |
| 852 | Y | D | -0.0695 | |
| 853 | E | D | -1.0550 | |
| 854 | R | D | -1.2144 | |
| 855 | A | D | -1.2671 | |
| 856 | E | D | -2.0143 | |
| 857 | W | D | 0.0000 | |
| 858 | R | D | -2.5050 | |
| 859 | E | D | -3.5485 | |
| 860 | N | D | -2.6626 | |
| 861 | I | D | 0.0000 | |
| 862 | R | D | -4.0763 | |
| 863 | E | D | -4.1262 | |
| 864 | Q | D | 0.0000 | |
| 865 | Q | D | -2.8460 | |
| 866 | K | D | -3.2586 | |
| 867 | K | D | -2.9133 | |
| 868 | C | D | -1.2030 | |
| 869 | F | D | 0.2430 | |
| 870 | R | D | -1.1169 | |
| 871 | S | D | -0.5505 | |
| 872 | F | D | -0.1487 | |
| 873 | S | D | -0.0386 | |
| 874 | L | D | 0.0989 | |
| 875 | T | D | 0.1350 | |
| 876 | S | D | 0.2417 | |
| 877 | V | D | 1.3237 | |
| 878 | E | D | -0.0570 | |
| 879 | L | D | -0.0766 | |
| 880 | Q | D | -0.1364 | |
| 881 | M | D | 0.7464 | |
| 882 | L | D | 0.1331 | |
| 883 | T | D | 0.0000 | |
| 884 | N | D | -0.7099 | |
| 885 | S | D | 0.1290 | |
| 886 | C | D | 0.3499 | |
| 707 | R | A | -2.2299 | |
| 708 | Q | A | -1.6317 | |
| 709 | L | A | -0.1046 | |
| 710 | L | A | -0.1887 | |
| 711 | K | A | -0.9949 | |
| 712 | D | A | -0.8584 | |
| 713 | S | A | -0.4243 | |
| 714 | F | A | 0.4160 | |
| 715 | M | A | 0.0000 | |
| 716 | V | A | 0.0000 | |
| 717 | E | A | 0.0000 | |
| 718 | L | A | -0.1190 | |
| 719 | V | A | -0.5714 | |
| 720 | E | A | -1.7668 | |
| 721 | G | A | -1.5119 | |
| 722 | A | A | -1.0886 | |
| 723 | R | A | -0.8577 | |
| 724 | K | A | -0.8367 | |
| 725 | L | A | 0.0370 | |
| 726 | R | A | 0.0000 | |
| 727 | H | A | -0.4122 | |
| 728 | V | A | 0.0000 | |
| 729 | F | A | 0.0000 | |
| 730 | L | A | 0.0000 | |
| 731 | F | A | 0.0000 | |
| 732 | T | A | -1.2530 | |
| 733 | D | A | -0.9264 | |
| 734 | L | A | 0.0000 | |
| 735 | L | A | 0.0000 | |
| 736 | L | A | 0.0000 | |
| 737 | C | A | 0.0000 | |
| 738 | T | A | 0.0000 | |
| 739 | K | A | -1.9160 | |
| 740 | L | A | 0.0384 | |
| 750 | Q | A | -1.2545 | |
| 751 | Y | A | -1.3965 | |
| 752 | D | A | -2.4641 | |
| 753 | C | A | -1.5237 | |
| 754 | K | A | -1.9833 | |
| 755 | W | A | 0.0000 | |
| 756 | Y | A | 0.0606 | |
| 757 | I | A | 0.0000 | |
| 758 | P | A | 0.0000 | |
| 759 | L | A | 0.0000 | |
| 760 | T | A | -0.4249 | |
| 761 | D | A | 0.0000 | |
| 762 | L | A | 0.0000 | |
| 763 | S | A | 0.0000 | |
| 764 | F | A | 0.0000 | |
| 765 | Q | A | -0.4072 | |
| 766 | M | A | -0.9645 | |
| 767 | V | A | 0.0000 | |
| 768 | D | A | -2.9300 | |
| 769 | E | A | -2.7966 | |
| 830 | P | A | -1.8825 | |
| 831 | S | A | -1.9815 | |
| 832 | M | A | -1.4672 | |
| 833 | A | A | 0.0000 | |
| 834 | F | A | 0.0000 | |
| 835 | R | A | -0.5111 | |
| 836 | V | A | 0.0000 | |
| 837 | H | A | -1.2935 | |
| 838 | S | A | 0.0000 | |
| 839 | R | A | -2.5563 | |
| 840 | N | A | -2.7034 | |
| 841 | G | A | -2.4107 | |
| 842 | K | A | -2.5393 | |
| 843 | S | A | -1.4816 | |
| 844 | Y | A | -0.2851 | |
| 845 | T | A | -0.0045 | |
| 846 | F | A | 0.0000 | |
| 847 | L | A | 0.0000 | |
| 848 | I | A | 0.0000 | |
| 849 | S | A | -0.6233 | |
| 850 | S | A | -1.1594 | |
| 851 | D | A | -1.8885 | |
| 852 | Y | A | -0.2470 | |
| 853 | E | A | -1.3760 | |
| 854 | R | A | -1.3388 | |
| 855 | A | A | -1.3292 | |
| 856 | E | A | -1.9903 | |
| 857 | W | A | 0.0000 | |
| 858 | R | A | -1.9056 | |
| 859 | E | A | -3.0212 | |
| 860 | N | A | -2.1960 | |
| 861 | I | A | 0.0000 | |
| 862 | R | A | -2.5651 | |
| 863 | E | A | -3.3400 | |
| 864 | Q | A | 0.0000 | |
| 865 | Q | A | 0.0000 | |
| 866 | K | A | -2.6770 | |
| 867 | K | A | -2.6536 | |
| 868 | C | A | -0.9902 | |
| 869 | F | A | 0.4430 | |
| 870 | R | A | -1.0306 | |
| 871 | S | A | -0.5725 | |
| 872 | F | A | 0.1015 | |
| 873 | S | A | 0.0491 | |
| 874 | L | A | 0.0365 | |
| 875 | T | A | -0.0971 | |
| 876 | S | A | -0.1487 | |
| 877 | V | A | 0.1285 | |
| 878 | E | A | -0.4121 | |
| 879 | L | A | -0.2796 | |
| 880 | Q | A | -0.5753 | |
| 881 | M | A | 0.0862 | |
| 882 | L | A | 0.0000 | |
| 883 | T | A | -0.6862 | |
| 884 | N | A | -0.7793 | |
| 885 | S | A | -0.1679 | |
| 886 | C | A | -0.2282 | |
| 1 | G | C | -0.1649 | |
| 2 | S | C | 0.2382 | |
| 3 | V | C | 1.3415 | |
| 4 | S | C | 0.5734 | |
| 5 | S | C | 0.4510 | |
| 6 | V | C | 0.3111 | |
| 7 | P | C | 0.0000 | |
| 8 | T | C | -1.5690 | |
| 9 | K | C | -2.5384 | |
| 10 | L | C | 0.0000 | |
| 11 | E | C | -1.6581 | |
| 12 | V | C | 0.1893 | |
| 13 | V | C | 1.3691 | |
| 14 | A | C | 0.8356 | |
| 15 | A | C | 0.2988 | |
| 16 | T | C | -0.1813 | |
| 17 | P | C | -1.1253 | |
| 18 | T | C | -1.0209 | |
| 19 | S | C | -0.5088 | |
| 20 | L | C | 0.0000 | |
| 21 | L | C | 0.8067 | |
| 22 | I | C | 0.0000 | |
| 23 | S | C | -0.8897 | |
| 24 | W | C | 0.0000 | |
| 25 | D | C | -2.5320 | |
| 26 | A | C | -1.1217 | |
| 27 | P | C | 0.1556 | |
| 28 | A | C | 0.5820 | |
| 29 | V | C | 1.1374 | |
| 30 | T | C | 0.4509 | |
| 31 | V | C | 0.2868 | |
| 32 | V | C | 0.2478 | |
| 33 | F | C | 0.0000 | |
| 34 | Y | C | 0.0000 | |
| 35 | V | C | 0.0000 | |
| 36 | I | C | 0.0000 | |
| 37 | T | C | -0.1128 | |
| 38 | Y | C | -0.0127 | |
| 39 | G | C | 0.0000 | |
| 40 | E | C | -1.2536 | |
| 41 | T | C | -1.1013 | |
| 42 | G | C | -1.1938 | |
| 43 | G | C | -1.2305 | |
| 44 | N | C | -1.4666 | |
| 45 | S | C | -0.7760 | |
| 46 | P | C | -0.1740 | |
| 47 | V | C | 0.6581 | |
| 48 | Q | C | -0.5896 | |
| 49 | E | C | -0.7462 | |
| 50 | F | C | -0.2502 | |
| 51 | T | C | -0.0263 | |
| 52 | V | C | -0.2300 | |
| 53 | P | C | -0.5974 | |
| 54 | G | C | -0.5416 | |
| 55 | S | C | -1.0435 | |
| 56 | K | C | -2.0314 | |
| 57 | S | C | -1.3905 | |
| 58 | T | C | -0.6788 | |
| 59 | A | C | 0.0000 | |
| 60 | T | C | 0.1310 | |
| 61 | I | C | 0.0000 | |
| 62 | S | C | -0.6450 | |
| 63 | G | C | -1.0304 | |
| 64 | L | C | 0.0000 | |
| 65 | K | C | -2.3532 | |
| 66 | P | C | -1.7699 | |
| 67 | G | C | -1.5004 | |
| 68 | V | C | -1.4219 | |
| 69 | D | C | -2.0436 | |
| 70 | Y | C | 0.0000 | |
| 71 | T | C | -0.6992 | |
| 72 | I | C | 0.0000 | |
| 73 | T | C | -0.1927 | |
| 74 | V | C | 0.0000 | |
| 75 | Y | C | 0.0000 | |
| 76 | A | C | 0.0000 | |
| 77 | E | C | 0.0000 | |
| 78 | Y | C | 0.0000 | |
| 79 | Y | C | -0.0242 | |
| 80 | G | C | -0.2244 | |
| 81 | M | C | 0.1607 | |
| 82 | T | C | -0.0452 | |
| 83 | G | C | 0.0000 | |
| 84 | S | C | -0.1287 | |
| 85 | P | C | -0.1307 | |
| 86 | I | C | 0.0450 | |
| 87 | S | C | -0.5365 | |
| 88 | I | C | -0.6110 | |
| 89 | N | C | -1.6585 | |
| 90 | Y | C | -1.3571 | |
| 91 | R | C | -2.5188 | |
| 92 | T | C | -1.7136 | |
| 4 | S | B | -0.1452 | |
| 5 | S | B | 0.0431 | |
| 6 | V | B | 0.1280 | |
| 7 | P | B | 0.0000 | |
| 8 | T | B | -1.5520 | |
| 9 | K | B | -2.6029 | |
| 10 | L | B | 0.0000 | |
| 11 | E | B | -2.1282 | |
| 12 | V | B | -0.3863 | |
| 13 | V | B | 0.2466 | |
| 14 | A | B | 0.0571 | |
| 15 | A | B | 0.2536 | |
| 16 | T | B | -0.0887 | |
| 17 | P | B | -0.8898 | |
| 18 | T | B | -0.9150 | |
| 19 | S | B | -0.4667 | |
| 20 | L | B | 0.0000 | |
| 21 | L | B | 0.4793 | |
| 22 | I | B | 0.0000 | |
| 23 | S | B | -1.1423 | |
| 24 | W | B | 0.0000 | |
| 25 | D | B | -2.4315 | |
| 26 | A | B | -0.8450 | |
| 27 | P | B | 0.0220 | |
| 28 | A | B | 0.7258 | |
| 29 | V | B | 1.8351 | |
| 30 | T | B | 1.2982 | |
| 31 | V | B | 1.1009 | |
| 32 | V | B | 1.4554 | |
| 33 | F | B | 0.7009 | |
| 34 | Y | B | 0.0000 | |
| 35 | V | B | 0.0000 | |
| 36 | I | B | 0.0000 | |
| 37 | T | B | -0.5992 | |
| 38 | Y | B | -0.3138 | |
| 39 | G | B | 0.0000 | |
| 40 | E | B | -1.2211 | |
| 41 | T | B | -0.9986 | |
| 42 | G | B | -1.1294 | |
| 43 | G | B | -1.1457 | |
| 44 | N | B | -1.4777 | |
| 45 | S | B | -0.8173 | |
| 46 | P | B | -0.3160 | |
| 47 | V | B | 0.3785 | |
| 48 | Q | B | -1.1676 | |
| 49 | E | B | -1.7162 | |
| 50 | F | B | -0.5278 | |
| 51 | T | B | 0.0495 | |
| 52 | V | B | 0.0013 | |
| 53 | P | B | -0.2258 | |
| 54 | G | B | 0.0709 | |
| 55 | S | B | -0.6281 | |
| 56 | K | B | -1.9058 | |
| 57 | S | B | -1.2702 | |
| 58 | T | B | -0.7756 | |
| 59 | A | B | 0.0000 | |
| 60 | T | B | 0.1170 | |
| 61 | I | B | 0.0000 | |
| 62 | S | B | -0.6201 | |
| 63 | G | B | -1.0037 | |
| 64 | L | B | 0.0000 | |
| 65 | K | B | -2.2851 | |
| 66 | P | B | -1.6534 | |
| 67 | G | B | -1.4200 | |
| 68 | V | B | -1.2723 | |
| 69 | D | B | -1.7432 | |
| 70 | Y | B | 0.0000 | |
| 71 | T | B | -0.6147 | |
| 72 | I | B | 0.0000 | |
| 73 | T | B | -0.3037 | |
| 74 | V | B | 0.0000 | |
| 75 | Y | B | 0.2452 | |
| 76 | A | B | 0.0000 | |
| 77 | E | B | 0.5551 | |
| 78 | Y | B | 1.1116 | |
| 79 | Y | B | 1.4224 | |
| 80 | G | B | 0.4686 | |
| 81 | M | B | 0.7011 | |
| 82 | T | B | 0.2998 | |
| 83 | G | B | 0.0000 | |
| 84 | S | B | -0.0742 | |
| 85 | P | B | -0.0130 | |
| 86 | I | B | 0.1044 | |
| 87 | S | B | -0.5032 | |
| 88 | I | B | -0.6956 | |
| 89 | N | B | -1.6660 | |
| 90 | Y | B | -1.4070 | |
| 91 | R | B | -2.3884 | |
| 92 | T | B | -1.5734 |