| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
C: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA E: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA D: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA G: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA F: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA H: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:19)
[INFO] Main: Simulation completed successfully. (00:08:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -3.0931 | |
| 2 | A | A | -1.9024 | |
| 3 | E | A | -1.9796 | |
| 4 | F | A | -0.1024 | |
| 5 | R | A | -1.9206 | |
| 6 | H | A | -2.3114 | |
| 7 | D | A | -2.9656 | |
| 8 | S | A | -1.6537 | |
| 9 | G | A | -0.8217 | |
| 10 | Y | A | 0.6046 | |
| 11 | E | A | -0.6346 | |
| 12 | V | A | 0.1785 | |
| 13 | H | A | -1.2782 | |
| 14 | H | A | -1.9248 | |
| 15 | Q | A | -2.0212 | |
| 16 | K | A | -2.2332 | |
| 17 | L | A | -0.3299 | |
| 18 | V | A | 1.0684 | |
| 19 | F | A | 1.8962 | |
| 20 | F | A | 1.9533 | |
| 21 | A | A | -0.6475 | |
| 22 | E | A | -3.4054 | |
| 23 | D | A | -4.0250 | |
| 24 | V | A | -2.1678 | |
| 25 | G | A | -1.7707 | |
| 26 | S | A | -1.5154 | |
| 27 | N | A | -2.9166 | |
| 28 | K | A | -3.0259 | |
| 29 | G | A | -1.1169 | |
| 30 | A | A | -0.6087 | |
| 31 | I | A | 1.2347 | |
| 32 | I | A | 0.9136 | |
| 33 | G | A | 0.9094 | |
| 34 | L | A | 0.9967 | |
| 35 | M | A | 1.0647 | |
| 36 | V | A | 0.6939 | |
| 37 | G | A | 0.0472 | |
| 38 | G | A | 0.7785 | |
| 39 | V | A | 2.5698 | |
| 40 | V | A | 2.7253 | |
| 41 | I | A | 3.1021 | |
| 42 | A | A | 1.0665 | |
| 1 | D | B | -3.6397 | |
| 2 | A | B | -2.4060 | |
| 3 | E | B | -2.2223 | |
| 4 | F | B | -0.8001 | |
| 5 | R | B | -1.9332 | |
| 6 | H | B | -2.1134 | |
| 7 | D | B | -2.7313 | |
| 8 | S | B | -1.5781 | |
| 9 | G | B | -0.9934 | |
| 10 | Y | B | 0.1898 | |
| 11 | E | B | -0.6175 | |
| 12 | V | B | -0.3189 | |
| 13 | H | B | -1.1669 | |
| 14 | H | B | -1.6627 | |
| 15 | Q | B | -2.0821 | |
| 16 | K | B | -1.9706 | |
| 17 | L | B | 0.0000 | |
| 18 | V | B | 0.6679 | |
| 19 | F | B | 0.0000 | |
| 20 | F | B | 1.2031 | |
| 21 | A | B | 0.0000 | |
| 22 | E | B | -4.4212 | |
| 23 | D | B | -5.1187 | |
| 24 | V | B | 0.0000 | |
| 25 | G | B | -2.0651 | |
| 26 | S | B | 0.0000 | |
| 27 | N | B | -2.8857 | |
| 28 | K | B | -3.1867 | |
| 29 | G | B | 0.0000 | |
| 30 | A | B | 0.0000 | |
| 31 | I | B | 0.0000 | |
| 32 | I | B | 0.0000 | |
| 33 | G | B | 0.0000 | |
| 34 | L | B | 0.0000 | |
| 35 | M | B | 0.0000 | |
| 36 | V | B | 0.0000 | |
| 37 | G | B | -0.2090 | |
| 38 | G | B | 0.0000 | |
| 39 | V | B | 1.9247 | |
| 40 | V | B | 0.0000 | |
| 41 | I | B | 2.5326 | |
| 42 | A | B | 0.9046 | |
| 1 | D | C | -3.6429 | |
| 2 | A | C | -2.3487 | |
| 3 | E | C | -2.2136 | |
| 4 | F | C | -0.8973 | |
| 5 | R | C | -1.8435 | |
| 6 | H | C | -1.7805 | |
| 7 | D | C | -2.3132 | |
| 8 | S | C | -1.3721 | |
| 9 | G | C | -0.8741 | |
| 10 | Y | C | -0.0797 | |
| 11 | E | C | -0.8353 | |
| 12 | V | C | -0.3829 | |
| 13 | H | C | -1.0055 | |
| 14 | H | C | -1.3330 | |
| 15 | Q | C | -1.4929 | |
| 16 | K | C | -1.6121 | |
| 17 | L | C | 0.0000 | |
| 18 | V | C | 0.4532 | |
| 19 | F | C | 0.0000 | |
| 20 | F | C | 0.8003 | |
| 21 | A | C | 0.0000 | |
| 22 | E | C | -4.4675 | |
| 23 | D | C | -5.1633 | |
| 24 | V | C | 0.0000 | |
| 25 | G | C | -1.9031 | |
| 26 | S | C | 0.0000 | |
| 27 | N | C | -2.2825 | |
| 28 | K | C | -2.8092 | |
| 29 | G | C | 0.0000 | |
| 30 | A | C | 0.0000 | |
| 31 | I | C | 0.0000 | |
| 32 | I | C | 0.0000 | |
| 33 | G | C | 0.0000 | |
| 34 | L | C | 0.0000 | |
| 35 | M | C | 0.0000 | |
| 36 | V | C | 0.0000 | |
| 37 | G | C | -0.6192 | |
| 38 | G | C | 0.0000 | |
| 39 | V | C | 1.4826 | |
| 40 | V | C | 0.0000 | |
| 41 | I | C | 2.0051 | |
| 42 | A | C | 0.5663 | |
| 1 | D | D | -3.3966 | |
| 2 | A | D | -2.2006 | |
| 3 | E | D | -1.8435 | |
| 4 | F | D | -0.6235 | |
| 5 | R | D | 0.0000 | |
| 6 | H | D | -1.6583 | |
| 7 | D | D | -2.0624 | |
| 8 | S | D | -1.2809 | |
| 9 | G | D | -0.9172 | |
| 10 | Y | D | -0.0531 | |
| 11 | E | D | -0.6767 | |
| 12 | V | D | -0.3401 | |
| 13 | H | D | -0.9106 | |
| 14 | H | D | -1.1800 | |
| 15 | Q | D | -1.3822 | |
| 16 | K | D | -1.4210 | |
| 17 | L | D | 0.0000 | |
| 18 | V | D | 0.4421 | |
| 19 | F | D | 0.0000 | |
| 20 | F | D | 0.7786 | |
| 21 | A | D | 0.0000 | |
| 22 | E | D | -4.3152 | |
| 23 | D | D | -5.0314 | |
| 24 | V | D | 0.0000 | |
| 25 | G | D | -1.8364 | |
| 26 | S | D | 0.0000 | |
| 27 | N | D | -2.2887 | |
| 28 | K | D | -2.7477 | |
| 29 | G | D | 0.0000 | |
| 30 | A | D | 0.0000 | |
| 31 | I | D | 0.0000 | |
| 32 | I | D | 0.0000 | |
| 33 | G | D | 0.0000 | |
| 34 | L | D | 0.0000 | |
| 35 | M | D | 0.0000 | |
| 36 | V | D | 0.0000 | |
| 37 | G | D | -0.5917 | |
| 38 | G | D | 0.0000 | |
| 39 | V | D | 1.3411 | |
| 40 | V | D | 0.0000 | |
| 41 | I | D | 1.8984 | |
| 42 | A | D | 0.5223 | |
| 1 | D | E | -3.5452 | |
| 2 | A | E | -2.1437 | |
| 3 | E | E | -1.8425 | |
| 4 | F | E | -0.5826 | |
| 5 | R | E | -1.5534 | |
| 6 | H | E | -1.6931 | |
| 7 | D | E | -2.1694 | |
| 8 | S | E | -1.2874 | |
| 9 | G | E | -0.8360 | |
| 10 | Y | E | -0.0726 | |
| 11 | E | E | -0.6909 | |
| 12 | V | E | -0.3257 | |
| 13 | H | E | -0.8595 | |
| 14 | H | E | -1.1198 | |
| 15 | Q | E | -1.3501 | |
| 16 | K | E | -1.3945 | |
| 17 | L | E | 0.0000 | |
| 18 | V | E | 0.4321 | |
| 19 | F | E | 0.0000 | |
| 20 | F | E | 0.8163 | |
| 21 | A | E | 0.0000 | |
| 22 | E | E | -4.1583 | |
| 23 | D | E | -5.0329 | |
| 24 | V | E | 0.0000 | |
| 25 | G | E | -1.8459 | |
| 26 | S | E | 0.0000 | |
| 27 | N | E | -2.3154 | |
| 28 | K | E | -2.9328 | |
| 29 | G | E | 0.0000 | |
| 30 | A | E | 0.0000 | |
| 31 | I | E | 0.0000 | |
| 32 | I | E | 0.0000 | |
| 33 | G | E | 0.0000 | |
| 34 | L | E | 0.0000 | |
| 35 | M | E | 0.0000 | |
| 36 | V | E | 0.0000 | |
| 37 | G | E | -0.5944 | |
| 38 | G | E | 0.0000 | |
| 39 | V | E | 1.3582 | |
| 40 | V | E | 0.0000 | |
| 41 | I | E | 1.9016 | |
| 42 | A | E | 0.5419 | |
| 1 | D | F | -3.6736 | |
| 2 | A | F | -2.3521 | |
| 3 | E | F | -2.1827 | |
| 4 | F | F | -0.5628 | |
| 5 | R | F | -1.3528 | |
| 6 | H | F | -1.4046 | |
| 7 | D | F | -1.7637 | |
| 8 | S | F | -1.0989 | |
| 9 | G | F | -0.8563 | |
| 10 | Y | F | -0.1218 | |
| 11 | E | F | -0.7437 | |
| 12 | V | F | -0.2937 | |
| 13 | H | F | -0.9227 | |
| 14 | H | F | -1.1210 | |
| 15 | Q | F | -1.5154 | |
| 16 | K | F | -1.6909 | |
| 17 | L | F | 0.0000 | |
| 18 | V | F | 0.5679 | |
| 19 | F | F | 0.0000 | |
| 20 | F | F | 0.8201 | |
| 21 | A | F | 0.0000 | |
| 22 | E | F | -4.2492 | |
| 23 | D | F | -4.9939 | |
| 24 | V | F | 0.0000 | |
| 25 | G | F | -1.9095 | |
| 26 | S | F | 0.0000 | |
| 27 | N | F | -2.4347 | |
| 28 | K | F | -2.7852 | |
| 29 | G | F | 0.0000 | |
| 30 | A | F | 0.0000 | |
| 31 | I | F | 0.0000 | |
| 32 | I | F | 0.0000 | |
| 33 | G | F | 0.0000 | |
| 34 | L | F | 0.0000 | |
| 35 | M | F | 0.0000 | |
| 36 | V | F | 0.0000 | |
| 37 | G | F | -0.5926 | |
| 38 | G | F | 0.0000 | |
| 39 | V | F | 1.4758 | |
| 40 | V | F | 0.0000 | |
| 41 | I | F | 2.0288 | |
| 42 | A | F | 0.5632 | |
| 1 | D | G | -3.8907 | |
| 2 | A | G | -2.6990 | |
| 3 | E | G | -2.8966 | |
| 4 | F | G | -1.2906 | |
| 5 | R | G | -2.2604 | |
| 6 | H | G | -2.0045 | |
| 7 | D | G | -2.3862 | |
| 8 | S | G | -1.3684 | |
| 9 | G | G | -1.0100 | |
| 10 | Y | G | -0.1595 | |
| 11 | E | G | -1.0585 | |
| 12 | V | G | -0.7084 | |
| 13 | H | G | -1.5069 | |
| 14 | H | G | -1.8408 | |
| 15 | Q | G | -2.1243 | |
| 16 | K | G | -1.8319 | |
| 17 | L | G | 0.0000 | |
| 18 | V | G | 1.2912 | |
| 19 | F | G | 0.0000 | |
| 20 | F | G | 1.4910 | |
| 21 | A | G | 0.0000 | |
| 22 | E | G | -3.6846 | |
| 23 | D | G | -4.6020 | |
| 24 | V | G | 0.0000 | |
| 25 | G | G | -1.7653 | |
| 26 | S | G | 0.0000 | |
| 27 | N | G | -2.7259 | |
| 28 | K | G | -2.9988 | |
| 29 | G | G | 0.0000 | |
| 30 | A | G | 0.0000 | |
| 31 | I | G | 0.0000 | |
| 32 | I | G | 0.0000 | |
| 33 | G | G | 0.0000 | |
| 34 | L | G | 0.0000 | |
| 35 | M | G | 0.0000 | |
| 36 | V | G | 0.0000 | |
| 37 | G | G | -0.2970 | |
| 38 | G | G | 0.0000 | |
| 39 | V | G | 2.0649 | |
| 40 | V | G | 0.0000 | |
| 41 | I | G | 2.5629 | |
| 42 | A | G | 0.9288 | |
| 1 | D | H | -3.2068 | |
| 2 | A | H | -2.0870 | |
| 3 | E | H | -2.7677 | |
| 4 | F | H | -1.2560 | |
| 5 | R | H | -3.0367 | |
| 6 | H | H | -2.8062 | |
| 7 | D | H | -3.2226 | |
| 8 | S | H | -1.6663 | |
| 9 | G | H | -0.9824 | |
| 10 | Y | H | 0.1797 | |
| 11 | E | H | -1.4682 | |
| 12 | V | H | -0.8629 | |
| 13 | H | H | -2.0351 | |
| 14 | H | H | -2.2164 | |
| 15 | Q | H | -2.6916 | |
| 16 | K | H | -2.1019 | |
| 17 | L | H | 0.5516 | |
| 18 | V | H | 2.4476 | |
| 19 | F | H | 2.8692 | |
| 20 | F | H | 1.7920 | |
| 21 | A | H | -0.5871 | |
| 22 | E | H | -3.1438 | |
| 23 | D | H | -3.4649 | |
| 24 | V | H | -1.3857 | |
| 25 | G | H | -1.4013 | |
| 26 | S | H | -1.5960 | |
| 27 | N | H | -2.8368 | |
| 28 | K | H | -3.0407 | |
| 29 | G | H | -1.3580 | |
| 30 | A | H | -1.2318 | |
| 31 | I | H | 0.4814 | |
| 32 | I | H | 0.8284 | |
| 33 | G | H | 1.0129 | |
| 34 | L | H | 1.1173 | |
| 35 | M | H | 0.7850 | |
| 36 | V | H | 0.3665 | |
| 37 | G | H | -0.0349 | |
| 38 | G | H | 0.8453 | |
| 39 | V | H | 2.7316 | |
| 40 | V | H | 2.7614 | |
| 41 | I | H | 3.1773 | |
| 42 | A | H | 1.1389 |