| Chain sequence(s) |
L: KVYTPGYGAPEVMQD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 203 | K | L | -1.3784 | |
| 204 | V | L | 1.5801 | |
| 205 | Y | L | 0.9415 | |
| 206 | T | L | 0.0002 | |
| 207 | P | L | -0.3509 | |
| 208 | G | L | -0.2727 | |
| 209 | Y | L | 1.2198 | |
| 210 | G | L | 0.1799 | |
| 211 | A | L | -0.0341 | |
| 212 | P | L | -0.5803 | |
| 213 | E | L | -1.7447 | |
| 214 | V | L | 0.2812 | |
| 215 | M | L | 0.6512 | |
| 216 | Q | L | -1.3828 | |
| 217 | D | L | -1.9290 |