Project name: 52e9d22f2d967a

Status: done

Started: 2026-05-28 12:51:36
Settings
Chain sequence(s) A: RSFMLTVGLVSWSYYR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:06)
Show buried residues

Minimal score value
-0.963
Maximal score value
3.5818
Average score
2.3396
Total score value
35.094

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 R A -0.9630
2 S A 0.8297
3 F A 2.8231
4 M A 3.1224
5 L A 3.5818
6 T A 2.8264
7 V A 2.6540
8 G A 1.7313
9 L A 2.4737
10 V A 2.5502
11 S A 2.1384
12 W A 2.6457
13 S A 2.8232
14 Y A 3.1527
15 Y A 2.7044
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018