Project name: query_structure

Status: done

Started: 2026-03-16 23:31:14
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Chain sequence(s) A: GSARDDVLIGDAGANVLEGLAGNDVLSGGAGDDHLVGDEGSDLLSGDAGNDYLCGGQGDDTYLFGVGYGHDAISESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:13)
Show buried residues

Minimal score value
-3.2018
Maximal score value
2.1735
Average score
-0.9738
Total score value
-148.0243

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.8785
2 S A -1.0559
3 A A -1.5411
4 R A -2.8284
5 D A -2.7718
6 D A -0.7388
7 V A 1.7627
8 L A 1.7031
9 I A 2.1735
10 G A 0.2118
11 D A -1.4721
12 A A -1.2331
13 G A -1.0609
14 A A -0.9944
15 N A -0.0943
16 V A 1.1181
17 L A 0.6303
18 E A -0.9183
19 G A 0.0000
20 L A -1.0435
21 A A -1.9362
22 G A -2.5062
23 N A -2.4753
24 D A 0.0000
25 V A 1.2178
26 L A 0.0000
27 S A 0.9530
28 G A 0.0000
29 G A -0.6666
30 A A -1.2740
31 G A -1.8030
32 D A -2.3559
33 D A 0.0000
34 H A -0.2040
35 L A 0.0000
36 V A -0.1315
37 G A 0.0000
38 D A -1.8738
39 E A -2.7187
40 G A -2.5865
41 S A -2.1233
42 D A 0.0000
43 L A 0.4790
44 L A 0.0000
45 S A 0.0000
46 G A 0.0000
47 D A -0.6544
48 A A -0.7703
49 G A -1.7028
50 N A -2.2965
51 D A 0.0000
52 Y A -0.0921
53 L A 0.0000
54 C A -0.2151
55 G A 0.0000
56 G A -1.6021
57 Q A -2.6924
58 G A -2.6150
59 D A -2.7682
60 D A 0.0000
61 T A -0.4917
62 Y A 0.0000
63 L A -0.5822
64 F A 0.0000
65 G A 0.0000
66 V A 1.0229
67 G A 0.0013
68 Y A -0.3327
69 G A -1.3558
70 H A -1.8331
71 D A 0.0000
72 A A -0.3999
73 I A 0.0000
74 S A -0.2851
75 E A 0.0000
76 S A -1.3166
77 G A -1.8581
78 G A -2.0008
79 G A -2.3070
80 H A -2.1172
81 D A 0.0000
82 T A -1.2132
83 I A 0.0000
84 R A -2.0411
85 I A 0.0000
86 N A -1.4576
87 A A 0.0000
88 G A -1.7720
89 A A -1.7446
90 D A -2.2367
91 Q A -1.8886
92 L A 0.0000
93 W A -0.2243
94 F A 0.0000
95 A A -1.5883
96 R A -3.0292
97 Q A -2.7135
98 G A -2.4603
99 N A -3.1389
100 D A -2.6337
101 L A 0.0000
102 E A -1.3604
103 I A 0.0000
104 R A -0.6011
105 I A 0.0000
106 L A -0.2339
107 G A -0.5021
108 T A -0.7677
109 D A -1.7746
110 D A 0.0000
111 A A -0.7705
112 L A 0.0000
113 T A 0.0000
114 V A 0.0000
115 H A -1.5763
116 D A -2.6228
117 W A 0.0000
118 Y A -2.4558
119 R A -3.2018
120 D A -2.5692
121 A A -1.9637
122 D A -2.8493
123 H A -2.3195
124 R A -1.9841
125 V A 0.0000
126 E A -1.8833
127 I A -1.1216
128 I A 0.0000
129 H A -1.7550
130 A A 0.0000
131 A A -1.6786
132 N A -2.1205
133 Q A -1.9796
134 A A -1.2663
135 V A -1.1097
136 D A -2.0028
137 Q A -1.4793
138 A A -1.1548
139 G A -1.4018
140 I A 0.0000
141 E A -2.0923
142 K A -2.3440
143 L A -1.0596
144 V A 0.0000
145 E A -2.6591
146 A A -1.2715
147 M A -0.8887
148 A A -1.2488
149 Q A -1.1219
150 Y A 0.0197
151 P A -0.7326
152 D A -1.6757
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Laboratory of Theory of Biopolymers 2018