Project name: query_structure

Status: done

Started: 2026-03-16 19:56:28
Settings
Chain sequence(s) A: AVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:56)
Show buried residues

Minimal score value
-3.7845
Maximal score value
2.5283
Average score
-0.5285
Total score value
-28.0122

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.6044
2 V A 1.5310
3 D A 0.1213
4 L A 1.4401
5 Y A 1.0277
6 V A 0.9139
7 C A 0.0000
8 L A 2.1611
9 L A 2.5283
10 C A 1.4875
11 G A 0.8159
12 S A -0.0594
13 G A -0.8666
14 N A -2.6776
15 D A -3.7845
16 E A -3.6582
17 D A -3.5273
18 R A -2.3461
19 L A -1.2784
20 L A 0.0000
21 L A -0.9857
22 C A 0.0000
23 D A -3.3457
24 G A -2.2375
25 C A -1.7757
26 D A -2.5072
27 D A -1.3562
28 S A 0.0000
29 Y A 0.0000
30 H A 0.0000
31 T A 0.0000
32 F A 1.7873
33 C A 2.1112
34 L A 0.0000
35 V A 1.9645
36 P A 1.0396
37 P A 0.8337
38 L A 0.1174
39 H A -1.2547
40 D A -1.9053
41 V A -1.1245
42 P A -1.7454
43 K A -2.4162
44 G A -2.4480
45 D A -3.1957
46 W A 0.0000
47 R A -2.5749
48 C A 0.0000
49 P A -0.3129
50 K A -1.3945
51 C A -0.7078
52 L A 0.7409
53 A A 0.2480
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Laboratory of Theory of Biopolymers 2018