| Chain sequence(s) |
A: AVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.6044 | |
| 2 | V | A | 1.5310 | |
| 3 | D | A | 0.1213 | |
| 4 | L | A | 1.4401 | |
| 5 | Y | A | 1.0277 | |
| 6 | V | A | 0.9139 | |
| 7 | C | A | 0.0000 | |
| 8 | L | A | 2.1611 | |
| 9 | L | A | 2.5283 | |
| 10 | C | A | 1.4875 | |
| 11 | G | A | 0.8159 | |
| 12 | S | A | -0.0594 | |
| 13 | G | A | -0.8666 | |
| 14 | N | A | -2.6776 | |
| 15 | D | A | -3.7845 | |
| 16 | E | A | -3.6582 | |
| 17 | D | A | -3.5273 | |
| 18 | R | A | -2.3461 | |
| 19 | L | A | -1.2784 | |
| 20 | L | A | 0.0000 | |
| 21 | L | A | -0.9857 | |
| 22 | C | A | 0.0000 | |
| 23 | D | A | -3.3457 | |
| 24 | G | A | -2.2375 | |
| 25 | C | A | -1.7757 | |
| 26 | D | A | -2.5072 | |
| 27 | D | A | -1.3562 | |
| 28 | S | A | 0.0000 | |
| 29 | Y | A | 0.0000 | |
| 30 | H | A | 0.0000 | |
| 31 | T | A | 0.0000 | |
| 32 | F | A | 1.7873 | |
| 33 | C | A | 2.1112 | |
| 34 | L | A | 0.0000 | |
| 35 | V | A | 1.9645 | |
| 36 | P | A | 1.0396 | |
| 37 | P | A | 0.8337 | |
| 38 | L | A | 0.1174 | |
| 39 | H | A | -1.2547 | |
| 40 | D | A | -1.9053 | |
| 41 | V | A | -1.1245 | |
| 42 | P | A | -1.7454 | |
| 43 | K | A | -2.4162 | |
| 44 | G | A | -2.4480 | |
| 45 | D | A | -3.1957 | |
| 46 | W | A | 0.0000 | |
| 47 | R | A | -2.5749 | |
| 48 | C | A | 0.0000 | |
| 49 | P | A | -0.3129 | |
| 50 | K | A | -1.3945 | |
| 51 | C | A | -0.7078 | |
| 52 | L | A | 0.7409 | |
| 53 | A | A | 0.2480 |