| Chain sequence(s) |
H: QVQLVQSGAEVKKPGSSVKVSCKASGYTFSSYWIHWVRQAPGQGLEWMGEMNPSNGGTNYNENFRRRATLIADESTSTAYMELSSLRSEDTAVYYCIVSYSGNYWSFDVWGQGTTVTVSS
L: EIVLTQSPATLSLSPGERATLSCRASSSVSYMHWYQQKPGSAPRLLIYATSNLASGIPARFSGSGSGTSFTLTISRLEPEDAAVYYCQQWSSNPPTFGQGTRLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27)
[INFO] Main: Simulation completed successfully. (00:01:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3687 | |
| 2 | V | H | -0.7319 | |
| 3 | Q | H | -1.0817 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.0370 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.6306 | |
| 8 | G | H | -0.6362 | |
| 9 | A | H | -0.0210 | |
| 11 | E | H | 0.0085 | |
| 12 | V | H | 0.9834 | |
| 13 | K | H | -0.7805 | |
| 14 | K | H | -2.0851 | |
| 15 | P | H | -1.9059 | |
| 16 | G | H | -1.4731 | |
| 17 | S | H | -1.2523 | |
| 18 | S | H | -1.3899 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.8508 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.5007 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.8020 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7194 | |
| 27 | G | H | -0.8976 | |
| 28 | Y | H | -0.3337 | |
| 29 | T | H | -0.0792 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.6816 | |
| 36 | S | H | 0.0161 | |
| 37 | Y | H | 0.4293 | |
| 38 | W | H | 0.4753 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | -0.4747 | |
| 44 | Q | H | -0.6992 | |
| 45 | A | H | -1.0286 | |
| 46 | P | H | -1.0326 | |
| 47 | G | H | -1.2073 | |
| 48 | Q | H | -1.8516 | |
| 49 | G | H | -1.2733 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8346 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | E | H | 0.0000 | |
| 56 | M | H | 0.0000 | |
| 57 | N | H | -0.7211 | |
| 58 | P | H | 0.0000 | |
| 59 | S | H | -1.3531 | |
| 62 | N | H | -1.8966 | |
| 63 | G | H | -1.3445 | |
| 64 | G | H | -0.9748 | |
| 65 | T | H | -0.7748 | |
| 66 | N | H | -1.3640 | |
| 67 | Y | H | -2.0409 | |
| 68 | N | H | -2.5870 | |
| 69 | E | H | -3.4821 | |
| 70 | N | H | -3.1727 | |
| 71 | F | H | 0.0000 | |
| 72 | R | H | -3.7931 | |
| 74 | R | H | -3.4928 | |
| 75 | R | H | -2.1303 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -1.0437 | |
| 78 | L | H | 0.0000 | |
| 79 | I | H | 0.2630 | |
| 80 | A | H | -0.4801 | |
| 81 | D | H | -1.0654 | |
| 82 | E | H | -1.8734 | |
| 83 | S | H | -1.0493 | |
| 84 | T | H | -0.8793 | |
| 85 | S | H | -1.0283 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2610 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.3951 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.2602 | |
| 93 | S | H | -1.1271 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3340 | |
| 96 | S | H | -1.9829 | |
| 97 | E | H | -2.2885 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7450 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.1051 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | I | H | 0.0000 | |
| 106 | V | H | 0.0000 | |
| 107 | S | H | 0.0000 | |
| 108 | Y | H | 1.0548 | |
| 109 | S | H | 0.1970 | |
| 110 | G | H | -0.4971 | |
| 111 | N | H | -1.0258 | |
| 112 | Y | H | 0.3209 | |
| 113 | W | H | 0.7610 | |
| 114 | S | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.1788 | |
| 117 | V | H | -0.1355 | |
| 118 | W | H | -0.3012 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1417 | |
| 121 | G | H | -0.5422 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.0110 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1933 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8135 | |
| 128 | S | H | -0.8931 | |
| 1 | E | L | -1.7071 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8823 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.3991 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.5016 | |
| 8 | P | L | -0.4091 | |
| 9 | A | L | -0.5873 | |
| 10 | T | L | -0.7639 | |
| 11 | L | L | -0.5072 | |
| 12 | S | L | -0.8204 | |
| 13 | L | L | -1.0081 | |
| 14 | S | L | -1.5827 | |
| 15 | P | L | -1.7658 | |
| 16 | G | L | -1.8764 | |
| 17 | E | L | -2.8128 | |
| 18 | R | L | -3.0742 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6793 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.4953 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.2666 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.3111 | |
| 27 | S | L | -0.5058 | |
| 28 | S | L | -0.6282 | |
| 29 | V | L | 0.0000 | |
| 37 | S | L | -0.2009 | |
| 38 | Y | L | 0.3375 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.7411 | |
| 45 | K | L | -1.2448 | |
| 46 | P | L | -0.7183 | |
| 47 | G | L | -0.9392 | |
| 48 | S | L | -0.9587 | |
| 49 | A | L | -0.6992 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.8268 | |
| 52 | L | L | -0.2076 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.8354 | |
| 56 | A | L | 0.3007 | |
| 57 | T | L | -0.0305 | |
| 65 | S | L | -0.2756 | |
| 66 | N | L | -0.3749 | |
| 67 | L | L | 0.1644 | |
| 68 | A | L | -0.1258 | |
| 69 | S | L | -0.4722 | |
| 70 | G | L | -0.4810 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -0.2237 | |
| 74 | A | L | -0.2816 | |
| 75 | R | L | -0.9792 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3783 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.4838 | |
| 80 | G | L | -0.6720 | |
| 83 | S | L | -0.6459 | |
| 84 | G | L | -0.6694 | |
| 85 | T | L | -0.8142 | |
| 86 | S | L | -0.9103 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.4600 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.7867 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.9355 | |
| 93 | R | L | -2.8965 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.8485 | |
| 96 | P | L | -1.6250 | |
| 97 | E | L | -1.9336 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.2261 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.6827 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | W | L | 0.0000 | |
| 108 | S | L | -0.2747 | |
| 109 | S | L | -1.1902 | |
| 114 | N | L | -1.8384 | |
| 115 | P | L | -1.7471 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | -0.3808 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.2096 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | R | L | -1.9044 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.0953 | |
| 126 | I | L | -0.9451 | |
| 127 | K | L | -1.6786 |