| Chain sequence(s) |
A: MRVLYLLFSFLFIFLMPLPGVFGGIGDPVTCLKSGAICHPVFCPRRYKQIGTCGLPGTKCCKKPEAAKPEEELVKANSWNQFLQSGKKVSEYARKKLAATERTYGLRFKDQRVHVVSKSERVKMPKKKKEEDIRKLVTMYPDNITIAEERKKRLSFFTGFDSVEHGPGPGTPSIQAIVPLLVPEEGPGPGMWIFLLSNKLSGHSVGPGPGKGEVVVNGRIAYVPQAAYRVKVKSMSKGPGPGSVIPMLMSFGPGPGHLSFLTFSW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:43)
[INFO] Main: Simulation completed successfully. (00:04:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.3687 | |
| 2 | R | A | 0.5267 | |
| 3 | V | A | 2.7555 | |
| 4 | L | A | 3.3101 | |
| 5 | Y | A | 3.2418 | |
| 6 | L | A | 3.6114 | |
| 7 | L | A | 4.1248 | |
| 8 | F | A | 4.5908 | |
| 9 | S | A | 4.4441 | |
| 10 | F | A | 5.4290 | |
| 11 | L | A | 5.3608 | |
| 12 | F | A | 5.7750 | |
| 13 | I | A | 5.7056 | |
| 14 | F | A | 5.5369 | |
| 15 | L | A | 4.8789 | |
| 16 | M | A | 3.8826 | |
| 17 | P | A | 2.1028 | |
| 18 | L | A | 2.7545 | |
| 19 | P | A | 1.0748 | |
| 20 | G | A | 1.1322 | |
| 21 | V | A | 2.5194 | |
| 22 | F | A | 2.4332 | |
| 23 | G | A | 0.6507 | |
| 24 | G | A | 0.2971 | |
| 25 | I | A | 0.0255 | |
| 26 | G | A | -0.4217 | |
| 27 | D | A | -0.4806 | |
| 28 | P | A | 0.5268 | |
| 29 | V | A | 1.3684 | |
| 30 | T | A | 0.1916 | |
| 31 | C | A | 0.0000 | |
| 32 | L | A | 1.2206 | |
| 33 | K | A | -0.6085 | |
| 34 | S | A | -0.2501 | |
| 35 | G | A | -0.6330 | |
| 36 | A | A | 0.0000 | |
| 37 | I | A | 0.5957 | |
| 38 | C | A | 0.9062 | |
| 39 | H | A | 0.3505 | |
| 40 | P | A | 0.9080 | |
| 41 | V | A | 1.9925 | |
| 42 | F | A | 1.5168 | |
| 43 | C | A | -0.4153 | |
| 44 | P | A | -1.4261 | |
| 45 | R | A | -2.8174 | |
| 46 | R | A | -3.3119 | |
| 47 | Y | A | -2.6704 | |
| 48 | K | A | -2.8569 | |
| 49 | Q | A | -1.6620 | |
| 50 | I | A | -0.6950 | |
| 51 | G | A | -0.6976 | |
| 52 | T | A | -0.7616 | |
| 53 | C | A | 0.0000 | |
| 54 | G | A | -0.2403 | |
| 55 | L | A | 0.7388 | |
| 56 | P | A | 0.2614 | |
| 57 | G | A | 0.3249 | |
| 58 | T | A | 0.4196 | |
| 59 | K | A | -0.1871 | |
| 60 | C | A | 0.0000 | |
| 61 | C | A | 0.0000 | |
| 62 | K | A | -1.9266 | |
| 63 | K | A | -3.0859 | |
| 64 | P | A | -2.5615 | |
| 65 | E | A | -2.6005 | |
| 66 | A | A | -1.5608 | |
| 67 | A | A | -1.7870 | |
| 68 | K | A | -2.9932 | |
| 69 | P | A | -2.8616 | |
| 70 | E | A | -3.7096 | |
| 71 | E | A | -3.1260 | |
| 72 | E | A | -2.2941 | |
| 73 | L | A | 0.0698 | |
| 74 | V | A | 0.7347 | |
| 75 | K | A | -0.8908 | |
| 76 | A | A | -0.7654 | |
| 77 | N | A | -1.7885 | |
| 78 | S | A | -0.8213 | |
| 79 | W | A | 0.0765 | |
| 80 | N | A | -1.5048 | |
| 81 | Q | A | -1.6364 | |
| 82 | F | A | -0.2274 | |
| 83 | L | A | -0.5901 | |
| 84 | Q | A | -1.6531 | |
| 85 | S | A | -1.5674 | |
| 86 | G | A | -1.8196 | |
| 87 | K | A | -2.5083 | |
| 88 | K | A | -2.7167 | |
| 89 | V | A | -1.1395 | |
| 90 | S | A | -1.5916 | |
| 91 | E | A | -2.5523 | |
| 92 | Y | A | -0.9848 | |
| 93 | A | A | -1.7266 | |
| 94 | R | A | -3.1552 | |
| 95 | K | A | -3.2108 | |
| 96 | K | A | -2.8411 | |
| 97 | L | A | -1.5118 | |
| 98 | A | A | -1.7095 | |
| 99 | A | A | -1.6207 | |
| 100 | T | A | -1.0523 | |
| 101 | E | A | -0.8393 | |
| 102 | R | A | -1.8861 | |
| 103 | T | A | -0.3391 | |
| 104 | Y | A | 0.6891 | |
| 105 | G | A | -0.0517 | |
| 106 | L | A | 0.8001 | |
| 107 | R | A | -0.7528 | |
| 108 | F | A | -0.6578 | |
| 109 | K | A | -2.7738 | |
| 110 | D | A | -3.3609 | |
| 111 | Q | A | -2.8511 | |
| 112 | R | A | -2.3958 | |
| 113 | V | A | 0.5121 | |
| 114 | H | A | 0.4702 | |
| 115 | V | A | 2.2868 | |
| 116 | V | A | 1.6692 | |
| 117 | S | A | -0.0489 | |
| 118 | K | A | -1.9531 | |
| 119 | S | A | -2.0661 | |
| 120 | E | A | -3.0800 | |
| 121 | R | A | -2.4688 | |
| 122 | V | A | -0.2313 | |
| 123 | K | A | -1.3620 | |
| 124 | M | A | -0.2895 | |
| 125 | P | A | -1.4511 | |
| 126 | K | A | -3.2079 | |
| 127 | K | A | -3.8792 | |
| 128 | K | A | -4.4493 | |
| 129 | K | A | -4.7419 | |
| 130 | E | A | -4.5864 | |
| 131 | E | A | -4.3858 | |
| 132 | D | A | -3.3580 | |
| 133 | I | A | -2.0526 | |
| 134 | R | A | -3.0831 | |
| 135 | K | A | -2.1994 | |
| 136 | L | A | 0.3303 | |
| 137 | V | A | 0.3134 | |
| 138 | T | A | 0.1465 | |
| 139 | M | A | 1.0640 | |
| 140 | Y | A | 1.0487 | |
| 141 | P | A | -0.1569 | |
| 142 | D | A | -1.7536 | |
| 143 | N | A | -1.1011 | |
| 144 | I | A | 0.5512 | |
| 145 | T | A | 0.3839 | |
| 146 | I | A | 1.3290 | |
| 147 | A | A | -0.6056 | |
| 148 | E | A | -2.7932 | |
| 149 | E | A | -3.9409 | |
| 150 | R | A | -4.6347 | |
| 151 | K | A | -4.3150 | |
| 152 | K | A | -3.8606 | |
| 153 | R | A | -2.4191 | |
| 154 | L | A | 0.4048 | |
| 155 | S | A | 1.2833 | |
| 156 | F | A | 2.8956 | |
| 157 | F | A | 3.1347 | |
| 158 | T | A | 1.4433 | |
| 159 | G | A | 0.7632 | |
| 160 | F | A | 1.2564 | |
| 161 | D | A | -0.8258 | |
| 162 | S | A | -0.3826 | |
| 163 | V | A | 0.2205 | |
| 164 | E | A | -1.8766 | |
| 165 | H | A | -1.7917 | |
| 166 | G | A | -1.4644 | |
| 167 | P | A | -1.2595 | |
| 168 | G | A | -1.0864 | |
| 169 | P | A | -0.8094 | |
| 170 | G | A | -0.8515 | |
| 171 | T | A | -0.3484 | |
| 172 | P | A | -0.1188 | |
| 173 | S | A | 0.0605 | |
| 174 | I | A | 1.4798 | |
| 175 | Q | A | 0.4260 | |
| 176 | A | A | 1.5862 | |
| 177 | I | A | 3.3380 | |
| 178 | V | A | 3.4066 | |
| 179 | P | A | 2.7318 | |
| 180 | L | A | 3.3509 | |
| 181 | L | A | 2.8193 | |
| 182 | V | A | 1.4593 | |
| 183 | P | A | -0.5941 | |
| 184 | E | A | -2.4311 | |
| 185 | E | A | -2.9044 | |
| 186 | G | A | -2.1418 | |
| 187 | P | A | -1.3228 | |
| 188 | G | A | -1.2285 | |
| 189 | P | A | -0.9442 | |
| 190 | G | A | 0.0364 | |
| 191 | M | A | 1.5517 | |
| 192 | W | A | 2.1256 | |
| 193 | I | A | 2.6832 | |
| 194 | F | A | 2.4270 | |
| 195 | L | A | 1.9193 | |
| 196 | L | A | 1.4373 | |
| 197 | S | A | -0.1708 | |
| 198 | N | A | -1.3279 | |
| 199 | K | A | -1.6611 | |
| 200 | L | A | -0.2284 | |
| 201 | S | A | -0.5607 | |
| 202 | G | A | -0.5088 | |
| 203 | H | A | -0.0447 | |
| 204 | S | A | 0.3391 | |
| 205 | V | A | 1.2390 | |
| 206 | G | A | -0.1016 | |
| 207 | P | A | -0.6971 | |
| 208 | G | A | -1.0809 | |
| 209 | P | A | -1.1027 | |
| 210 | G | A | -1.5740 | |
| 211 | K | A | -1.8585 | |
| 212 | G | A | -0.6121 | |
| 213 | E | A | -0.0629 | |
| 214 | V | A | 0.8367 | |
| 215 | V | A | 0.7401 | |
| 216 | V | A | -0.2465 | |
| 217 | N | A | -1.5891 | |
| 218 | G | A | -1.2679 | |
| 219 | R | A | -1.4663 | |
| 220 | I | A | 0.3667 | |
| 221 | A | A | 0.8716 | |
| 222 | Y | A | 0.9391 | |
| 223 | V | A | 0.5433 | |
| 224 | P | A | -0.3771 | |
| 225 | Q | A | -1.2454 | |
| 226 | A | A | -0.3820 | |
| 227 | A | A | -0.1056 | |
| 228 | Y | A | -0.3526 | |
| 229 | R | A | -1.5549 | |
| 230 | V | A | -0.8751 | |
| 231 | K | A | -1.8745 | |
| 232 | V | A | -0.5382 | |
| 233 | K | A | -1.3650 | |
| 234 | S | A | -0.8447 | |
| 235 | M | A | -0.1241 | |
| 236 | S | A | -1.0562 | |
| 237 | K | A | -1.7994 | |
| 238 | G | A | -1.1713 | |
| 239 | P | A | -1.0079 | |
| 240 | G | A | -1.3595 | |
| 241 | P | A | -0.9491 | |
| 242 | G | A | -0.8018 | |
| 243 | S | A | -0.0204 | |
| 244 | V | A | 1.3731 | |
| 245 | I | A | 1.6454 | |
| 246 | P | A | 1.5213 | |
| 247 | M | A | 1.7557 | |
| 248 | L | A | 1.6357 | |
| 249 | M | A | 1.3230 | |
| 250 | S | A | 0.7824 | |
| 251 | F | A | 0.3930 | |
| 252 | G | A | -0.7281 | |
| 253 | P | A | -0.9364 | |
| 254 | G | A | -1.0353 | |
| 255 | P | A | -1.2198 | |
| 256 | G | A | -1.5903 | |
| 257 | H | A | -1.1972 | |
| 258 | L | A | -0.0438 | |
| 259 | S | A | 0.6041 | |
| 260 | F | A | 1.7946 | |
| 261 | L | A | 1.8327 | |
| 262 | T | A | 1.7745 | |
| 263 | F | A | 2.5448 | |
| 264 | S | A | 1.5952 | |
| 265 | W | A | 1.8340 |