| Chain sequence(s) |
A: CASKNERCGNALYGTKGPGCCNGKCICRTVPRKGVNSCRCM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.0529 | |
| 2 | A | A | 0.0000 | |
| 3 | S | A | -1.6413 | |
| 4 | K | A | -2.5995 | |
| 5 | N | A | -2.1258 | |
| 6 | E | A | -2.4512 | |
| 7 | R | A | -2.7242 | |
| 8 | C | A | 0.0000 | |
| 9 | G | A | -1.4144 | |
| 10 | N | A | -0.2112 | |
| 11 | A | A | 0.2659 | |
| 12 | L | A | 1.4967 | |
| 13 | Y | A | 0.4983 | |
| 14 | G | A | -0.2574 | |
| 15 | T | A | -0.8874 | |
| 16 | K | A | -1.9384 | |
| 17 | G | A | -1.8530 | |
| 18 | P | A | -1.1224 | |
| 19 | G | A | -1.2130 | |
| 20 | C | A | -1.1918 | |
| 21 | C | A | -0.4480 | |
| 22 | N | A | -1.5709 | |
| 23 | G | A | -1.7168 | |
| 24 | K | A | -1.8580 | |
| 25 | C | A | -1.2684 | |
| 26 | I | A | -0.4733 | |
| 27 | C | A | 0.0000 | |
| 28 | R | A | -1.5231 | |
| 29 | T | A | -0.9571 | |
| 30 | V | A | -0.7903 | |
| 31 | P | A | -1.1502 | |
| 32 | R | A | -2.3589 | |
| 33 | K | A | -2.1826 | |
| 34 | G | A | 0.0000 | |
| 35 | V | A | 0.4134 | |
| 36 | N | A | -0.5776 | |
| 37 | S | A | -1.0530 | |
| 38 | C | A | 0.0000 | |
| 39 | R | A | -2.0752 | |
| 40 | C | A | 0.0000 | |
| 41 | M | A | -0.5848 |