Project name: query_structure

Status: done

Started: 2026-03-16 22:57:28
Settings
Chain sequence(s) A: CASKNERCGNALYGTKGPGCCNGKCICRTVPRKGVNSCRCM
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:23)
Show buried residues

Minimal score value
-2.7242
Maximal score value
1.4967
Average score
-0.9632
Total score value
-39.492

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.0529
2 A A 0.0000
3 S A -1.6413
4 K A -2.5995
5 N A -2.1258
6 E A -2.4512
7 R A -2.7242
8 C A 0.0000
9 G A -1.4144
10 N A -0.2112
11 A A 0.2659
12 L A 1.4967
13 Y A 0.4983
14 G A -0.2574
15 T A -0.8874
16 K A -1.9384
17 G A -1.8530
18 P A -1.1224
19 G A -1.2130
20 C A -1.1918
21 C A -0.4480
22 N A -1.5709
23 G A -1.7168
24 K A -1.8580
25 C A -1.2684
26 I A -0.4733
27 C A 0.0000
28 R A -1.5231
29 T A -0.9571
30 V A -0.7903
31 P A -1.1502
32 R A -2.3589
33 K A -2.1826
34 G A 0.0000
35 V A 0.4134
36 N A -0.5776
37 S A -1.0530
38 C A 0.0000
39 R A -2.0752
40 C A 0.0000
41 M A -0.5848
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Laboratory of Theory of Biopolymers 2018