| Chain sequence(s) |
A: SIDVKYIGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSVEVENITAQVQFSKTVIGKARLNNITIIGPLDMKQIDYTVPTVIAEEMSYMYDFCTLISIKVHNIVLMMQVTVTTTYFGHSEQISQERYQYVDCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | TS185A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.413428 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:26)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:27)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 120 | S | A | 0.5720 | |
| 121 | I | A | 1.7567 | |
| 122 | D | A | -0.4233 | |
| 123 | V | A | 0.8837 | |
| 124 | K | A | -0.5936 | |
| 125 | Y | A | 1.0208 | |
| 126 | I | A | 1.0145 | |
| 127 | G | A | 0.3680 | |
| 128 | V | A | 1.1126 | |
| 129 | K | A | -0.8094 | |
| 130 | S | A | -0.1545 | |
| 131 | A | A | 0.5013 | |
| 132 | Y | A | 1.5772 | |
| 133 | V | A | 1.5923 | |
| 134 | S | A | 0.4857 | |
| 135 | Y | A | 0.5954 | |
| 136 | D | A | -0.8978 | |
| 137 | V | A | -0.2779 | |
| 138 | Q | A | -2.1565 | |
| 139 | K | A | -2.7127 | |
| 140 | R | A | -2.2655 | |
| 141 | T | A | -0.0815 | |
| 142 | I | A | 2.2960 | |
| 143 | Y | A | 3.0146 | |
| 144 | L | A | 2.4839 | |
| 145 | N | A | 0.5805 | |
| 146 | I | A | 1.0494 | |
| 147 | T | A | -0.1822 | |
| 148 | N | A | -0.6112 | |
| 149 | T | A | -0.3624 | |
| 150 | L | A | 0.4839 | |
| 151 | N | A | -0.1900 | |
| 152 | I | A | 0.7432 | |
| 153 | T | A | -0.5165 | |
| 154 | N | A | -1.9045 | |
| 155 | N | A | -2.0487 | |
| 156 | N | A | -1.2288 | |
| 157 | Y | A | 1.1188 | |
| 158 | Y | A | 1.9054 | |
| 159 | S | A | 1.2727 | |
| 160 | V | A | 1.2386 | |
| 161 | E | A | -0.9139 | |
| 162 | V | A | 0.1523 | |
| 163 | E | A | -1.5881 | |
| 164 | N | A | -1.1091 | |
| 165 | I | A | 0.1720 | |
| 166 | T | A | -0.1197 | |
| 167 | A | A | 0.1317 | |
| 168 | Q | A | 0.1200 | |
| 169 | V | A | 1.1095 | |
| 170 | Q | A | 0.6850 | |
| 171 | F | A | 1.1892 | |
| 172 | S | A | -0.1992 | |
| 173 | K | A | -0.9717 | |
| 174 | T | A | 0.3681 | |
| 175 | V | A | 2.2089 | |
| 176 | I | A | 2.1985 | |
| 177 | G | A | -0.1062 | |
| 178 | K | A | -1.7039 | |
| 179 | A | A | -0.9815 | |
| 180 | R | A | -1.5673 | |
| 181 | L | A | 0.2360 | |
| 182 | N | A | -0.9537 | |
| 183 | N | A | -0.6447 | |
| 184 | I | A | 1.6629 | |
| 185 | S | A | 1.7409 | mutated: TS185A |
| 186 | I | A | 3.5532 | |
| 187 | I | A | 2.9881 | |
| 188 | G | A | 1.8320 | |
| 189 | P | A | 0.9988 | |
| 190 | L | A | 0.9916 | |
| 191 | D | A | -0.8396 | |
| 192 | M | A | -0.1302 | |
| 193 | K | A | -1.7265 | |
| 194 | Q | A | -1.5034 | |
| 195 | I | A | 0.3924 | |
| 196 | D | A | -0.5812 | |
| 197 | Y | A | 1.1834 | |
| 198 | T | A | 0.9524 | |
| 199 | V | A | 2.1454 | |
| 200 | P | A | 1.2708 | |
| 201 | T | A | 1.7941 | |
| 202 | V | A | 2.6503 | |
| 203 | I | A | 2.4222 | |
| 204 | A | A | 0.1710 | |
| 205 | E | A | -1.5163 | |
| 206 | E | A | -2.0792 | |
| 207 | M | A | -0.0827 | |
| 208 | S | A | 0.1397 | |
| 209 | Y | A | 1.5721 | |
| 210 | M | A | 1.8037 | |
| 211 | Y | A | 1.8623 | |
| 212 | D | A | 0.4504 | |
| 213 | F | A | 1.9199 | |
| 214 | C | A | 1.1417 | |
| 215 | T | A | 1.3552 | |
| 216 | L | A | 2.4900 | |
| 217 | I | A | 3.0206 | |
| 218 | S | A | 1.9884 | |
| 219 | I | A | 1.8329 | |
| 220 | K | A | -0.4672 | |
| 221 | V | A | 0.6796 | |
| 222 | H | A | -0.2710 | |
| 223 | N | A | -0.2967 | |
| 224 | I | A | 1.9062 | |
| 225 | V | A | 2.9453 | |
| 226 | L | A | 3.3558 | |
| 227 | M | A | 2.3938 | |
| 228 | M | A | 0.9229 | |
| 229 | Q | A | 0.5323 | |
| 230 | V | A | 1.4427 | |
| 231 | T | A | 1.1674 | |
| 232 | V | A | 2.3458 | |
| 233 | T | A | 0.8896 | |
| 234 | T | A | 0.8422 | |
| 235 | T | A | 0.8659 | |
| 236 | Y | A | 1.6936 | |
| 237 | F | A | 1.8324 | |
| 238 | G | A | -0.1325 | |
| 239 | H | A | -1.4199 | |
| 240 | S | A | -1.5639 | |
| 241 | E | A | -2.2939 | |
| 242 | Q | A | -0.8726 | |
| 243 | I | A | 0.7063 | |
| 244 | S | A | -0.2087 | |
| 245 | Q | A | -1.6037 | |
| 246 | E | A | -2.7124 | |
| 247 | R | A | -2.4104 | |
| 248 | Y | A | -0.4253 | |
| 249 | Q | A | -0.6817 | |
| 250 | Y | A | 0.8422 | |
| 251 | V | A | 0.5966 | |
| 252 | D | A | -1.2599 | |
| 253 | C | A | -0.1556 | |
| 254 | G | A | -0.6289 |