| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDHYVITYGETGGNSPVQEFTVPGSKSTATISGLSPGVDYTITVYAWVSDEYTHGYYSYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7677 | |
| 2 | S | A | 0.7761 | |
| 3 | S | A | 0.6296 | |
| 4 | V | A | 0.2393 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6605 | |
| 7 | K | A | -2.6484 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9446 | |
| 10 | V | A | 0.0841 | |
| 11 | V | A | 1.5254 | |
| 12 | A | A | 0.8943 | |
| 13 | A | A | 0.3089 | |
| 14 | T | A | -0.1904 | |
| 15 | P | A | -0.7997 | |
| 16 | T | A | -0.5312 | |
| 17 | S | A | -0.3142 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7551 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9552 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6938 | |
| 24 | A | A | -1.2441 | |
| 25 | P | A | 0.0440 | |
| 26 | A | A | 0.4379 | |
| 27 | V | A | 0.5687 | |
| 28 | T | A | -0.1704 | |
| 29 | V | A | -0.4545 | |
| 30 | D | A | -1.5152 | |
| 31 | H | A | -1.0191 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.0258 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.3491 | |
| 36 | Y | A | -0.2878 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4684 | |
| 39 | T | A | -1.4095 | |
| 40 | G | A | -1.3272 | |
| 41 | G | A | -1.4409 | |
| 42 | N | A | -1.5445 | |
| 43 | S | A | -0.8378 | |
| 44 | P | A | -0.3007 | |
| 45 | V | A | 0.4847 | |
| 46 | Q | A | -0.7589 | |
| 47 | E | A | -1.4722 | |
| 48 | F | A | -0.5094 | |
| 49 | T | A | -0.1277 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.1746 | |
| 52 | G | A | -1.3492 | |
| 53 | S | A | -1.3804 | |
| 54 | K | A | -1.9732 | |
| 55 | S | A | -1.4115 | |
| 56 | T | A | -0.7347 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2983 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4705 | |
| 61 | G | A | -0.6860 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.9007 | |
| 64 | P | A | -1.0593 | |
| 65 | G | A | -1.1906 | |
| 66 | V | A | -1.1820 | |
| 67 | D | A | -2.3850 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8573 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.0212 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.7914 | |
| 74 | A | A | 0.0000 | |
| 75 | W | A | 0.6290 | |
| 76 | V | A | 0.2187 | |
| 77 | S | A | -0.5501 | |
| 78 | D | A | -0.7573 | |
| 79 | E | A | -1.6230 | |
| 80 | Y | A | -0.0386 | |
| 81 | T | A | -0.2845 | |
| 82 | H | A | -1.1041 | |
| 83 | G | A | -0.1195 | |
| 84 | Y | A | 0.7092 | |
| 85 | Y | A | 1.7016 | |
| 86 | S | A | 1.1411 | |
| 87 | Y | A | 0.9311 | |
| 88 | S | A | 0.2702 | |
| 89 | P | A | 0.2649 | |
| 90 | I | A | 0.1636 | |
| 91 | S | A | -0.3238 | |
| 92 | I | A | -0.7251 | |
| 93 | N | A | -1.8407 | |
| 94 | Y | A | -1.5934 | |
| 95 | R | A | -2.5498 | |
| 96 | T | A | -1.2959 |