| Chain sequence(s) |
A: MLPAPKNLVVSEVTEDSARLSSWDDPAAFYESFLIQYQESEKVGEAIVLTVVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAIFTTGG
C: MLPAPKNLVVSEVTEDSARLSWDDPAAFYESFLIQYQESEKVGEAIVLTVVPGSERSSYDLTGLKPGTEYTVSIIYGVHNVYKDTNMRGLPLSAIFTTGG B: MLPAPKNLVVSEVTEDSARLSWDDPAAFYESFLIQYQESSEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVVSIYGVHNVYKDTNMRGLPLSAIIFTTGGH D: MLPAPKNLVVSEVTEDSARLSWDDPAAFYESFLIQYQESEKEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDDTNMRGLPLSAIIFTTGGH input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:59)
[INFO] Main: Simulation completed successfully. (00:04:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.1893 | |
| 2 | L | A | 0.7549 | |
| 3 | P | A | 0.2392 | |
| 4 | A | A | -0.1073 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -1.9778 | |
| 7 | N | A | -1.3607 | |
| 8 | L | A | 0.0000 | |
| 9 | V | A | 0.0000 | |
| 10 | V | A | 0.0000 | |
| 11 | S | A | 0.0000 | |
| 12 | E | A | -1.9459 | |
| 13 | V | A | -0.8833 | |
| 14 | T | A | -1.5561 | |
| 15 | E | A | -2.5394 | |
| 16 | D | A | -2.3671 | |
| 17 | S | A | -1.5889 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.0373 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5548 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.1364 | |
| 24 | D | A | 0.0000 | |
| 25 | P | A | -0.3346 | |
| 26 | A | A | 0.2827 | |
| 27 | A | A | 0.0997 | |
| 28 | F | A | 0.3651 | |
| 29 | Y | A | 0.0000 | |
| 30 | E | A | -1.5930 | |
| 31 | S | A | -0.9417 | |
| 32 | F | A | 0.0000 | |
| 33 | L | A | 0.2709 | |
| 34 | I | A | 0.0000 | |
| 35 | Q | A | 0.4094 | |
| 36 | Y | A | 0.0000 | |
| 37 | Q | A | -0.9120 | |
| 38 | E | A | -1.8203 | |
| 39 | S | A | -1.5850 | |
| 40 | E | A | -2.6150 | |
| 41 | K | A | -2.0090 | |
| 42 | V | A | -0.0477 | |
| 43 | G | A | -0.6921 | |
| 44 | E | A | -1.7230 | |
| 45 | A | A | -0.3421 | |
| 46 | I | A | 0.8587 | |
| 47 | V | A | 1.5855 | |
| 48 | L | A | 0.0000 | |
| 49 | T | A | 0.2219 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.7892 | |
| 52 | G | A | -0.7390 | |
| 53 | S | A | -0.8395 | |
| 54 | E | A | -0.5710 | |
| 55 | R | A | 0.0000 | |
| 56 | S | A | -0.3785 | |
| 57 | Y | A | 0.0000 | |
| 58 | D | A | -0.9675 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.2297 | |
| 61 | G | A | -1.4775 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.8927 | |
| 64 | P | A | -2.4631 | |
| 65 | G | A | -1.9320 | |
| 66 | T | A | 0.0000 | |
| 67 | E | A | -2.1794 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.0647 | |
| 70 | V | A | 0.0000 | |
| 71 | S | A | 0.3635 | |
| 72 | I | A | 0.0000 | |
| 73 | Y | A | 0.1047 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.8062 | |
| 76 | H | A | -0.9069 | |
| 77 | N | A | -1.5939 | |
| 78 | V | A | 0.2206 | |
| 79 | Y | A | 0.0577 | |
| 80 | K | A | -2.0624 | |
| 81 | D | A | -2.5598 | |
| 82 | T | A | -1.4879 | |
| 83 | N | A | -1.9255 | |
| 84 | M | A | -0.8600 | |
| 85 | R | A | -1.1163 | |
| 86 | G | A | 0.0000 | |
| 87 | L | A | 0.9862 | |
| 88 | P | A | 0.0552 | |
| 89 | L | A | -0.1124 | |
| 90 | S | A | 0.1709 | |
| 91 | A | A | 0.8468 | |
| 92 | I | A | 1.5753 | |
| 93 | F | A | 0.0000 | |
| 94 | T | A | -1.0118 | |
| 95 | T | A | 0.0000 | |
| 96 | G | A | -1.6330 | |
| 97 | G | A | -1.5551 | |
| 1 | M | B | 1.1788 | |
| 2 | L | B | 0.7297 | |
| 3 | P | B | 0.2733 | |
| 4 | A | B | 0.1599 | |
| 5 | P | B | 0.0000 | |
| 6 | K | B | -1.3671 | |
| 7 | N | B | -0.8991 | |
| 8 | L | B | 0.0000 | |
| 9 | V | B | -0.0967 | |
| 10 | V | B | 0.0000 | |
| 11 | S | B | -1.2623 | |
| 12 | E | B | -2.0842 | |
| 13 | V | B | -1.7287 | |
| 14 | T | B | -2.0449 | |
| 15 | E | B | -3.1603 | |
| 16 | D | B | -3.0034 | |
| 17 | S | B | -2.2464 | |
| 18 | A | B | 0.0000 | |
| 19 | R | B | -1.5625 | |
| 20 | L | B | 0.0000 | |
| 21 | S | B | -0.6073 | |
| 22 | W | B | 0.0000 | |
| 23 | D | B | 0.0000 | |
| 24 | D | B | 0.0000 | |
| 25 | P | B | -0.1129 | |
| 26 | A | B | 0.1475 | |
| 27 | A | B | -0.0285 | |
| 28 | F | B | 0.1041 | |
| 29 | Y | B | 0.0000 | |
| 30 | E | B | -2.0193 | |
| 31 | S | B | -1.4337 | |
| 32 | F | B | 0.0000 | |
| 33 | L | B | 0.4658 | |
| 34 | I | B | 0.0000 | |
| 35 | Q | B | 0.6965 | |
| 36 | Y | B | 0.0000 | |
| 37 | Q | B | -0.8955 | |
| 38 | E | B | -1.8698 | |
| 39 | S | B | -1.5584 | |
| 40 | E | B | -2.4403 | |
| 41 | K | B | -1.9670 | |
| 42 | V | B | 0.1382 | |
| 43 | G | B | -0.8676 | |
| 44 | E | B | -1.6843 | |
| 45 | A | B | -0.1565 | |
| 46 | I | B | 1.2969 | |
| 47 | V | B | 2.2538 | |
| 48 | L | B | 1.3693 | |
| 49 | T | B | 0.4640 | |
| 50 | V | B | 0.0000 | |
| 51 | P | B | -1.0052 | |
| 52 | G | B | -1.2674 | |
| 53 | S | B | -1.1591 | |
| 54 | E | B | -1.3494 | |
| 55 | R | B | -0.9312 | |
| 56 | S | B | -0.7478 | |
| 57 | Y | B | -0.6089 | |
| 58 | D | B | -1.5745 | |
| 59 | L | B | 0.0000 | |
| 60 | T | B | -1.4617 | |
| 61 | G | B | -1.5263 | |
| 62 | L | B | 0.0000 | |
| 63 | K | B | -3.1182 | |
| 64 | P | B | -2.7976 | |
| 65 | G | B | -2.0109 | |
| 66 | T | B | 0.0000 | |
| 67 | E | B | -1.8976 | |
| 68 | Y | B | 0.0000 | |
| 69 | T | B | -0.5863 | |
| 70 | V | B | 0.0000 | |
| 71 | S | B | 0.1864 | |
| 72 | I | B | 0.0000 | |
| 73 | Y | B | 0.0000 | |
| 74 | G | B | 0.0000 | |
| 75 | V | B | -0.8971 | |
| 76 | H | B | -0.9010 | |
| 77 | N | B | -1.2193 | |
| 78 | V | B | 0.5833 | |
| 79 | Y | B | 0.2734 | |
| 80 | K | B | -1.9623 | |
| 81 | D | B | -2.4731 | |
| 82 | T | B | -1.2908 | |
| 83 | N | B | -1.9361 | |
| 84 | M | B | -0.5276 | |
| 85 | R | B | -1.1204 | |
| 86 | G | B | 0.0000 | |
| 87 | L | B | 1.2543 | |
| 88 | P | B | 0.2625 | |
| 89 | L | B | 0.0000 | |
| 90 | S | B | -0.3888 | |
| 91 | A | B | 0.0000 | |
| 92 | I | B | 0.1773 | |
| 93 | F | B | 0.0000 | |
| 94 | T | B | -1.2047 | |
| 95 | T | B | 0.0000 | |
| 96 | G | B | -2.2085 | |
| 97 | G | B | -2.1198 | |
| 98 | H | B | -1.8052 | |
| 1 | M | C | 1.1944 | |
| 2 | L | C | 0.7949 | |
| 3 | P | C | 0.3005 | |
| 4 | A | C | 0.0143 | |
| 5 | P | C | 0.0000 | |
| 6 | K | C | -1.3174 | |
| 7 | N | C | -0.9866 | |
| 8 | L | C | 0.0000 | |
| 9 | V | C | 0.0000 | |
| 10 | V | C | 0.0000 | |
| 11 | S | C | 0.0000 | |
| 12 | E | C | -1.8429 | |
| 13 | V | C | -0.7947 | |
| 14 | T | C | -1.5552 | |
| 15 | E | C | -2.6543 | |
| 16 | D | C | -2.3427 | |
| 17 | S | C | -1.5010 | |
| 18 | A | C | 0.0000 | |
| 19 | R | C | -0.7420 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | 0.0000 | |
| 22 | W | C | 0.0000 | |
| 23 | D | C | -0.8553 | |
| 24 | D | C | 0.0000 | |
| 25 | P | C | -0.2724 | |
| 26 | A | C | 0.2645 | |
| 27 | A | C | 0.0891 | |
| 28 | F | C | 0.3486 | |
| 29 | Y | C | 0.0000 | |
| 30 | E | C | -1.6510 | |
| 31 | S | C | -0.9541 | |
| 32 | F | C | 0.0000 | |
| 33 | L | C | 0.3772 | |
| 34 | I | C | 0.0000 | |
| 35 | Q | C | 0.6097 | |
| 36 | Y | C | 0.0000 | |
| 37 | Q | C | -0.7057 | |
| 38 | E | C | -1.6444 | |
| 39 | S | C | -1.4680 | |
| 40 | E | C | -2.2825 | |
| 41 | K | C | -1.6108 | |
| 42 | V | C | 0.0815 | |
| 43 | G | C | -0.6381 | |
| 44 | E | C | -1.4434 | |
| 45 | A | C | -0.2263 | |
| 46 | I | C | 0.9774 | |
| 47 | V | C | 1.8815 | |
| 48 | L | C | 1.0581 | |
| 49 | T | C | 0.3620 | |
| 50 | V | C | 0.0000 | |
| 51 | P | C | -0.7907 | |
| 52 | G | C | -0.7767 | |
| 53 | S | C | -0.8490 | |
| 54 | E | C | -0.5409 | |
| 55 | R | C | 0.0000 | |
| 56 | S | C | -0.2608 | |
| 57 | Y | C | -0.1595 | |
| 58 | D | C | -0.7517 | |
| 59 | L | C | 0.0000 | |
| 60 | T | C | 0.0000 | |
| 61 | G | C | -1.4884 | |
| 62 | L | C | 0.0000 | |
| 63 | K | C | -2.8776 | |
| 64 | P | C | -2.5012 | |
| 65 | G | C | -1.9137 | |
| 66 | T | C | 0.0000 | |
| 67 | E | C | -1.8300 | |
| 68 | Y | C | 0.0000 | |
| 69 | T | C | -0.1134 | |
| 70 | V | C | 0.0000 | |
| 71 | S | C | 0.3359 | |
| 72 | I | C | 0.0000 | |
| 73 | Y | C | 0.1066 | |
| 74 | G | C | 0.0000 | |
| 75 | V | C | -0.6896 | |
| 76 | H | C | -0.7936 | |
| 77 | N | C | -1.5168 | |
| 78 | V | C | 0.2727 | |
| 79 | Y | C | 0.0675 | |
| 80 | K | C | -2.0610 | |
| 81 | D | C | -2.5491 | |
| 82 | T | C | -1.4597 | |
| 83 | N | C | -1.8090 | |
| 84 | M | C | -0.6111 | |
| 85 | R | C | -0.8111 | |
| 86 | G | C | 0.0000 | |
| 87 | L | C | 0.8366 | |
| 88 | P | C | 0.0481 | |
| 89 | L | C | -0.0346 | |
| 90 | S | C | 0.1492 | |
| 91 | A | C | 0.6919 | |
| 92 | I | C | 1.2496 | |
| 93 | F | C | 0.0000 | |
| 94 | T | C | -0.9551 | |
| 95 | T | C | 0.0000 | |
| 96 | G | C | -1.6602 | |
| 97 | G | C | -1.6227 | |
| 1 | M | D | 1.2009 | |
| 2 | L | D | 0.8130 | |
| 3 | P | D | 0.3344 | |
| 4 | A | D | 0.2171 | |
| 5 | P | D | 0.0000 | |
| 6 | K | D | -1.2582 | |
| 7 | N | D | -0.9704 | |
| 8 | L | D | 0.0000 | |
| 9 | V | D | 0.0000 | |
| 10 | V | D | 0.0000 | |
| 11 | S | D | -1.3788 | |
| 12 | E | D | -2.2180 | |
| 13 | V | D | 0.0000 | |
| 14 | T | D | -2.1713 | |
| 15 | E | D | -3.1315 | |
| 16 | D | D | -3.2134 | |
| 17 | S | D | -2.3715 | |
| 18 | A | D | 0.0000 | |
| 19 | R | D | -1.5685 | |
| 20 | L | D | 0.0000 | |
| 21 | S | D | -0.6900 | |
| 22 | W | D | 0.0000 | |
| 23 | D | D | -0.8139 | |
| 24 | D | D | 0.0000 | |
| 25 | P | D | -0.1377 | |
| 26 | A | D | 0.1478 | |
| 27 | A | D | -0.0240 | |
| 28 | F | D | 0.2097 | |
| 29 | Y | D | 0.0000 | |
| 30 | E | D | -1.9752 | |
| 31 | S | D | -1.4205 | |
| 32 | F | D | 0.0000 | |
| 33 | L | D | 0.4578 | |
| 34 | I | D | 0.0000 | |
| 35 | Q | D | 0.6710 | |
| 36 | Y | D | 0.0000 | |
| 37 | Q | D | -1.2493 | |
| 38 | E | D | -2.1492 | |
| 39 | S | D | -1.8160 | |
| 40 | E | D | -2.9209 | |
| 41 | K | D | -3.1798 | |
| 44 | E | D | -2.0627 | |
| 45 | A | D | -0.4325 | |
| 46 | I | D | 1.2998 | |
| 47 | V | D | 2.2155 | |
| 48 | L | D | 1.3476 | |
| 49 | T | D | 0.4562 | |
| 50 | V | D | 0.0000 | |
| 51 | P | D | -1.0093 | |
| 52 | G | D | -1.2541 | |
| 53 | S | D | -1.1698 | |
| 54 | E | D | -1.4092 | |
| 55 | R | D | -1.0169 | |
| 56 | S | D | -0.7840 | |
| 57 | Y | D | -0.5770 | |
| 58 | D | D | -1.4732 | |
| 59 | L | D | 0.0000 | |
| 60 | T | D | -1.4705 | |
| 61 | G | D | -1.5831 | |
| 62 | L | D | 0.0000 | |
| 63 | K | D | -3.0650 | |
| 64 | P | D | -2.7217 | |
| 65 | G | D | -1.9780 | |
| 66 | T | D | -1.8908 | |
| 67 | E | D | -1.5008 | |
| 68 | Y | D | 0.0000 | |
| 69 | T | D | -0.5332 | |
| 70 | V | D | 0.0000 | |
| 71 | S | D | 0.1634 | |
| 72 | I | D | 0.0000 | |
| 73 | Y | D | 0.0000 | |
| 74 | G | D | 0.0000 | |
| 75 | V | D | -0.8432 | |
| 76 | H | D | -0.8195 | |
| 77 | N | D | -1.1099 | |
| 78 | V | D | 0.7706 | |
| 79 | Y | D | 0.3780 | |
| 80 | K | D | -1.9200 | |
| 81 | D | D | -2.4465 | |
| 82 | T | D | -1.2423 | |
| 83 | N | D | -1.8638 | |
| 84 | M | D | -0.4703 | |
| 85 | R | D | -1.1088 | |
| 86 | G | D | 0.0000 | |
| 87 | L | D | 1.3138 | |
| 88 | P | D | 0.3099 | |
| 89 | L | D | 0.0000 | |
| 90 | S | D | -0.3710 | |
| 91 | A | D | 0.0000 | |
| 92 | I | D | 0.1421 | |
| 93 | F | D | 0.0000 | |
| 94 | T | D | -0.9426 | |
| 95 | T | D | 0.0000 | |
| 96 | G | D | -2.0448 | |
| 97 | G | D | -2.0309 | |
| 98 | H | D | -1.7866 |