Project name: 53abc1b1afaa05b

Status: done

Started: 2025-10-09 05:24:58
Settings
Chain sequence(s) D: VHLTPVEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:56)
Show buried residues

Minimal score value
-3.3044
Maximal score value
1.1692
Average score
-0.9551
Total score value
-139.4467

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 V D 0.5807
3 H D -0.6931
4 L D 0.0000
5 T D -0.1705
6 P D 0.0457
7 V D 1.1692
8 E D -0.2170
9 K D -0.7030
10 S D -0.1569
11 A D -0.0621
12 V D 0.0000
13 T D -0.6300
14 A D -0.6223
15 L D 0.0000
16 W D -0.5706
17 G D -1.1820
18 K D -1.8702
19 V D 0.0000
20 N D -1.8119
21 V D -0.6505
22 D D -2.5127
23 E D -2.8489
24 V D 0.0000
25 G D 0.0000
26 G D 0.0000
27 E D -1.9229
28 A D 0.0000
29 L D 0.0000
30 G D 0.0000
31 R D -0.3981
32 L D 0.0000
33 L D 0.0000
34 V D 0.3979
35 V D 0.9598
36 Y D 0.7510
37 P D 0.0721
38 W D 0.2123
39 T D 0.0000
40 Q D -1.0801
41 R D -1.9247
42 F D -0.5437
43 F D -1.3094
44 E D -2.4906
45 S D -1.5306
46 F D -1.3872
47 G D -1.9802
48 D D -2.6979
49 L D 0.0000
50 S D -1.1066
51 T D -1.0573
52 P D -1.0359
53 D D -2.1181
54 A D -1.5951
55 V D 0.0000
56 M D -1.1547
57 G D -1.5318
58 N D 0.0000
59 P D -1.3256
60 K D -1.8468
61 V D 0.0000
62 K D -2.3552
63 A D -1.9524
64 H D -1.6038
65 G D 0.0000
66 K D -2.4341
67 K D -2.1229
68 V D -0.7810
69 L D 0.0000
70 G D -1.1658
71 A D -0.9235
72 F D 0.0000
73 S D -0.7545
74 D D -1.6033
75 G D 0.0000
76 L D -0.8490
77 A D -0.9795
78 H D -1.9723
79 L D -1.5863
80 D D -2.5344
81 N D -2.7190
82 L D 0.0000
83 K D -2.4756
84 G D -1.8016
85 T D -1.4420
86 F D 0.0000
87 A D -1.0259
88 T D -0.5358
89 L D -0.5216
90 S D 0.0000
91 E D -2.6015
92 L D -1.3047
93 H D -1.5396
94 C D 0.0000
95 D D -3.3044
96 K D -2.6105
97 L D -1.2249
98 H D -2.0291
99 V D -1.7911
100 D D -2.6572
101 P D -2.4116
102 E D -3.0029
103 N D 0.0000
104 F D 0.0000
105 R D -2.8459
106 L D -1.2281
107 L D -0.8368
108 G D 0.0000
109 N D -1.2968
110 V D 0.0000
111 L D 0.0000
112 V D 0.0000
113 C D -0.4601
114 V D 0.0000
115 L D 0.0000
116 A D -1.3098
117 H D -1.6361
118 H D -1.8960
119 F D -1.7881
120 G D -2.1564
121 K D -2.7436
122 E D -2.3631
123 F D 0.0000
124 T D -1.2101
125 P D -0.8754
126 P D -0.3618
127 V D -0.5360
128 Q D -0.9828
129 A D -0.6802
130 A D 0.0000
131 Y D 0.0000
132 Q D -1.1880
133 K D -0.6926
134 V D 0.0000
135 V D 0.0000
136 A D -0.7938
137 G D -0.5056
138 V D 0.0000
139 A D 0.0000
140 N D -1.7004
141 A D 0.0000
142 L D -1.1923
143 A D 0.0000
144 H D -2.4330
145 K D -2.9014
146 Y D -1.9886
147 H D -1.6766
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Laboratory of Theory of Biopolymers 2018