| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIIKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHDGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGHPLPAAPPPSPLYVPPPPSSPHAVPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPPINVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9435 | |
| 2 | L | A | 1.9632 | |
| 3 | P | A | 0.8285 | |
| 4 | P | A | 0.3744 | |
| 5 | T | A | 0.1213 | |
| 6 | T | A | 0.1342 | |
| 7 | P | A | 0.1734 | |
| 8 | V | A | 1.2161 | |
| 9 | A | A | 0.0855 | |
| 10 | K | A | -1.0198 | |
| 11 | V | A | -0.1474 | |
| 12 | Q | A | -1.3936 | |
| 13 | S | A | -1.5436 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4053 | |
| 16 | E | A | -2.4319 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4601 | |
| 20 | P | A | 0.1065 | |
| 21 | T | A | 0.1107 | |
| 22 | S | A | -0.1701 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1077 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2885 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8947 | |
| 31 | R | A | -2.6785 | |
| 32 | L | A | -0.7962 | |
| 33 | L | A | 1.1552 | |
| 34 | T | A | 1.3603 | |
| 35 | V | A | 1.8080 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1719 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6199 | |
| 40 | E | A | -1.6149 | |
| 41 | D | A | -0.7155 | |
| 42 | I | A | 1.0374 | |
| 43 | I | A | 1.1514 | |
| 44 | K | A | -1.2791 | |
| 45 | D | A | -2.3904 | |
| 46 | G | A | -1.4232 | |
| 47 | K | A | -1.0535 | |
| 48 | V | A | 1.4224 | |
| 49 | V | A | 2.0247 | |
| 50 | V | A | 1.3115 | |
| 51 | P | A | 0.5068 | |
| 52 | K | A | -0.6251 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1673 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3913 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2780 | |
| 70 | K | A | -1.7971 | |
| 71 | F | A | -0.6473 | |
| 72 | A | A | -0.5789 | |
| 73 | L | A | -0.8782 | |
| 74 | P | A | -1.2857 | |
| 75 | Q | A | -2.5014 | |
| 76 | K | A | -3.1049 | |
| 77 | D | A | -2.9896 | |
| 78 | F | A | -1.6663 | |
| 79 | Y | A | -1.8929 | |
| 80 | D | A | -2.6899 | |
| 81 | P | A | -2.3029 | |
| 82 | E | A | -3.0465 | |
| 83 | K | A | -3.3918 | |
| 84 | E | A | -2.4569 | |
| 85 | R | A | -1.2935 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6384 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9698 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3543 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6934 | |
| 99 | G | A | -0.5398 | |
| 100 | P | A | -0.4144 | |
| 101 | L | A | 0.0225 | |
| 102 | G | A | -0.2373 | |
| 103 | K | A | -0.6566 | |
| 104 | G | A | -0.4763 | |
| 105 | T | A | -0.4662 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1415 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4309 | |
| 110 | L | A | 0.4399 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9935 | |
| 113 | K | A | -0.5132 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2064 | |
| 117 | T | A | -0.8195 | |
| 118 | E | A | -1.7874 | |
| 119 | N | A | -1.9716 | |
| 120 | P | A | -1.3283 | |
| 121 | T | A | -0.6732 | |
| 122 | A | A | -0.3439 | |
| 123 | P | A | -0.4323 | |
| 124 | V | A | -0.4656 | |
| 125 | H | A | -1.5941 | |
| 126 | D | A | -2.6641 | |
| 127 | G | A | -2.0322 | |
| 128 | A | A | -1.4271 | |
| 129 | D | A | -2.1519 | |
| 130 | V | A | -1.4247 | |
| 131 | R | A | -0.7639 | |
| 132 | V | A | 0.4135 | |
| 133 | A | A | 0.4511 | |
| 134 | F | A | 0.2832 | |
| 135 | S | A | -0.0794 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5926 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2174 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5493 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2028 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1235 | |
| 157 | D | A | 0.3050 | |
| 158 | I | A | 0.8405 | |
| 159 | A | A | 0.1233 | |
| 160 | E | A | -1.4755 | |
| 161 | P | A | -0.2240 | |
| 162 | C | A | 0.1838 | |
| 163 | P | A | -0.1791 | |
| 164 | G | A | -0.0935 | |
| 165 | L | A | 0.5630 | |
| 166 | P | A | -0.1302 | |
| 167 | P | A | -0.3467 | |
| 168 | G | A | -0.4259 | |
| 169 | A | A | -0.0255 | |
| 170 | C | A | 0.7454 | |
| 171 | P | A | 0.5525 | |
| 172 | P | A | 0.8447 | |
| 173 | I | A | 2.0463 | |
| 174 | Q | A | 0.8468 | |
| 175 | L | A | 1.4417 | |
| 176 | V | A | 0.8313 | |
| 177 | N | A | -0.3121 | |
| 178 | S | A | 0.0214 | |
| 179 | V | A | 0.4335 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3903 | |
| 182 | D | A | 0.0833 | |
| 183 | G | A | -0.1514 | |
| 184 | D | A | -0.5185 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0852 | |
| 190 | F | A | 0.0421 | |
| 191 | G | A | -0.1019 | |
| 192 | N | A | -0.2524 | |
| 193 | M | A | -0.1099 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3668 | |
| 197 | E | A | -2.5903 | |
| 198 | L | A | -1.2003 | |
| 199 | Q | A | -2.5479 | |
| 200 | Q | A | -3.3110 | |
| 201 | D | A | -3.5813 | |
| 202 | R | A | -3.3319 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1751 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3556 | |
| 211 | S | A | -1.8928 | |
| 212 | T | A | -1.4122 | |
| 213 | R | A | -2.0249 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1541 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3647 | |
| 220 | L | A | 0.5906 | |
| 221 | K | A | -1.1375 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8249 | |
| 224 | N | A | -1.5038 | |
| 225 | E | A | -1.2441 | |
| 226 | A | A | -0.5951 | |
| 227 | Y | A | -0.3522 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6835 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0785 | |
| 234 | F | A | 0.2676 | |
| 235 | G | A | -0.8127 | |
| 236 | R | A | -2.4890 | |
| 237 | R | A | -2.6306 | |
| 238 | E | A | -1.7020 | |
| 239 | Q | A | 0.0451 | |
| 240 | V | A | 1.5474 | |
| 241 | Y | A | 1.2590 | |
| 242 | A | A | 0.1970 | |
| 243 | R | A | -1.1305 | |
| 244 | H | A | -1.0004 | |
| 245 | F | A | 0.0134 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.8233 | |
| 249 | S | A | -1.5179 | |
| 250 | G | A | -1.2761 | |
| 251 | P | A | -1.2284 | |
| 252 | D | A | -1.3890 | |
| 253 | G | A | -1.2864 | |
| 254 | H | A | -1.4669 | |
| 255 | P | A | -1.0060 | |
| 256 | L | A | 0.3780 | |
| 257 | P | A | 0.0262 | |
| 258 | A | A | 0.3083 | |
| 259 | A | A | 0.3150 | |
| 260 | P | A | -0.2736 | |
| 261 | P | A | -0.1470 | |
| 262 | P | A | 0.0574 | |
| 263 | S | A | 0.5885 | |
| 264 | P | A | 0.7054 | |
| 265 | L | A | 1.9368 | |
| 266 | Y | A | 1.8081 | |
| 267 | V | A | 1.9666 | |
| 268 | P | A | 0.8921 | |
| 269 | P | A | 0.1580 | |
| 270 | P | A | -0.4575 | |
| 271 | P | A | -0.4326 | |
| 272 | S | A | -0.6231 | |
| 273 | S | A | -0.4578 | |
| 274 | P | A | -0.5840 | |
| 275 | H | A | -0.6030 | |
| 276 | A | A | 0.1654 | |
| 277 | V | A | 1.2784 | |
| 278 | P | A | 0.3792 | |
| 279 | P | A | -0.5182 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4658 | |
| 282 | D | A | -0.9526 | |
| 283 | Y | A | 0.8499 | |
| 284 | F | A | 0.6929 | |
| 285 | G | A | 0.2375 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9066 | |
| 291 | L | A | 1.6188 | |
| 292 | V | A | 0.6278 | |
| 293 | S | A | -0.1642 | |
| 294 | S | A | -0.9654 | |
| 295 | D | A | -1.8436 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1060 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6478 | |
| 301 | R | A | -1.8716 | |
| 302 | P | A | -0.9827 | |
| 303 | F | A | -0.1945 | |
| 304 | W | A | -0.5586 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0797 | |
| 307 | R | A | -2.8288 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2534 | |
| 310 | G | A | -1.2218 | |
| 311 | N | A | -1.2623 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7300 | |
| 319 | N | A | -0.8283 | |
| 320 | E | A | -1.0200 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3573 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1037 | |
| 333 | N | A | 0.5497 | |
| 334 | F | A | 1.7505 | |
| 335 | T | A | 0.9214 | |
| 336 | I | A | 0.4711 | |
| 337 | S | A | -0.9851 | |
| 338 | Q | A | -1.7707 | |
| 339 | Q | A | -1.4169 | |
| 340 | L | A | 0.0852 | |
| 341 | S | A | 0.0008 | |
| 342 | T | A | -0.1665 | |
| 343 | P | A | -0.4697 | |
| 344 | P | A | -0.3162 | |
| 345 | I | A | 0.3306 | |
| 346 | N | A | -0.0995 | |
| 347 | V | A | 1.6394 | |
| 348 | Y | A | 1.4812 | |
| 349 | D | A | -0.1221 | |
| 350 | P | A | -0.7167 | |
| 351 | S | A | -0.6279 | |
| 352 | N | A | -0.4251 | |
| 353 | F | A | -1.0466 | |
| 354 | K | A | -2.1059 | |
| 355 | N | A | -1.7367 | |
| 356 | Y | A | 0.0660 | |
| 357 | L | A | 0.7418 | |
| 358 | R | A | 0.9979 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3702 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0752 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0319 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6860 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3071 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3128 | |
| 376 | L | A | -1.7096 | |
| 377 | D | A | -1.9873 | |
| 378 | P | A | -1.0353 | |
| 379 | G | A | -1.0128 | |
| 380 | V | A | -0.9324 | |
| 381 | L | A | -0.5314 | |
| 382 | A | A | -0.6577 | |
| 383 | H | A | -0.8070 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4156 | |
| 386 | T | A | -0.5528 | |
| 387 | M | A | -0.2998 | |
| 388 | N | A | -0.8709 | |
| 389 | P | A | -1.2309 | |
| 390 | T | A | -1.4074 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3965 | |
| 393 | E | A | -2.7329 | |
| 394 | N | A | -2.4302 | |
| 395 | W | A | -1.3195 | |
| 396 | N | A | -1.2960 | |
| 397 | L | A | -0.2062 | |
| 398 | G | A | 0.5166 | |
| 399 | F | A | 2.4005 | |
| 400 | V | A | 1.7936 | |
| 401 | P | A | 0.0387 | |
| 402 | P | A | -1.8107 | |
| 403 | K | A | -3.4095 | |
| 404 | E | A | -3.8004 | |
| 405 | R | A | -3.7942 | |
| 406 | E | A | -3.7291 | |
| 407 | D | A | -2.8270 | |
| 408 | P | A | -1.7388 | |
| 409 | Y | A | -0.9758 | |
| 410 | K | A | -2.0943 | |
| 411 | G | A | -0.6341 | |
| 412 | L | A | 0.6783 | |
| 413 | I | A | 1.5833 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4141 | |
| 416 | E | A | -1.7349 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9672 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0586 | |
| 421 | E | A | -2.7796 | |
| 422 | R | A | -2.5576 | |
| 423 | F | A | -1.2806 | |
| 424 | S | A | -1.4818 | |
| 425 | Q | A | -1.8175 | |
| 426 | D | A | -2.9119 | |
| 427 | L | A | -1.9865 | |
| 428 | D | A | -2.7671 | |
| 429 | Q | A | -2.6151 | |
| 430 | F | A | -1.4132 | |
| 431 | A | A | -0.8847 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5506 | |
| 435 | K | A | -0.6894 | |
| 436 | F | A | 0.1591 | |
| 437 | L | A | 1.0412 | |
| 438 | Y | A | 0.8369 | |
| 439 | Q | A | -0.2696 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine