| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWVPPWRPVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVNGIGPQLTIPDGISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6716 | |
| 2 | S | A | 0.0138 | |
| 3 | D | A | -0.9099 | |
| 4 | V | A | -0.8295 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.3617 | |
| 7 | D | A | -2.7058 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7789 | |
| 10 | V | A | 0.0738 | |
| 11 | V | A | 1.5235 | |
| 12 | A | A | 0.8782 | |
| 13 | A | A | 0.2878 | |
| 14 | T | A | -0.5354 | |
| 15 | P | A | -1.1326 | |
| 16 | T | A | -0.9996 | |
| 17 | S | A | -0.5408 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7112 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.5839 | |
| 22 | W | A | 0.0000 | |
| 23 | V | A | -0.3868 | |
| 24 | P | A | -0.5385 | |
| 25 | P | A | 0.0614 | |
| 26 | W | A | 0.7924 | |
| 27 | R | A | -0.6628 | |
| 28 | P | A | -0.9777 | |
| 29 | V | A | -0.9801 | |
| 30 | R | A | -1.6976 | |
| 31 | Y | A | -0.9299 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.8801 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.3930 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5025 | |
| 39 | T | A | -1.1988 | |
| 40 | G | A | -1.2098 | |
| 41 | G | A | -1.3226 | |
| 42 | N | A | -1.5146 | |
| 43 | S | A | -0.8551 | |
| 44 | P | A | -0.3978 | |
| 45 | V | A | 0.2912 | |
| 46 | Q | A | -1.1911 | |
| 47 | E | A | -1.8539 | |
| 48 | F | A | -0.8058 | |
| 49 | T | A | -0.3176 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.1072 | |
| 52 | G | A | -1.3681 | |
| 53 | S | A | -1.4085 | |
| 54 | K | A | -1.7284 | |
| 55 | S | A | -0.7039 | |
| 56 | T | A | -0.4032 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2294 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6613 | |
| 61 | G | A | -1.0310 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3580 | |
| 64 | P | A | -1.6619 | |
| 65 | G | A | -1.4383 | |
| 66 | V | A | -1.4088 | |
| 67 | D | A | -2.0603 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7568 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.5678 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.1097 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | -0.3197 | |
| 76 | N | A | -0.4703 | |
| 77 | G | A | -0.1964 | |
| 78 | I | A | 1.1997 | |
| 79 | G | A | 0.4698 | |
| 80 | P | A | 0.0915 | |
| 81 | Q | A | -0.1625 | |
| 82 | L | A | 1.2558 | |
| 83 | T | A | 0.8497 | |
| 84 | I | A | 1.5791 | |
| 85 | P | A | -0.0638 | |
| 86 | D | A | -1.3288 | |
| 87 | G | A | -0.8192 | |
| 88 | I | A | -0.8335 | |
| 89 | S | A | -0.6844 | |
| 90 | I | A | -0.7256 | |
| 91 | N | A | -1.7273 | |
| 92 | Y | A | -1.4498 | |
| 93 | R | A | -2.5184 | |
| 94 | T | A | -1.5111 |