| Chain sequence(s) |
A: TATGDEWWAKCKQVDVLDSEMSYYDSDPGKHKNTVIFLHGNPTSSYLWRNVIPHVEPLARCLAPDLIGMGKSGKLPNHSYRFVDHYRYLSAWFDSVNLPEKVTIVCHDWGSGLGFHWCNEHRDRVKGIVHMESVVSPLKGWESFPETARDILPQALRSEAGEEMVLKKNFFIERLLPSSIMRKLSEEEMDAYREPFVEPGESRRPTLTWPREIPIKGDGPEDVIEIVKSYNKWLSTSKDIPKLFINADPGFFSNAIKKVTKNWPNQKTVTVKGLHFLQEDSPEEIGEAIADFLNELT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:32)
[INFO] Main: Simulation completed successfully. (00:04:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 11 | T | A | -0.6265 | |
| 12 | A | A | -1.2438 | |
| 13 | T | A | -2.3035 | |
| 14 | G | A | -2.5524 | |
| 15 | D | A | -3.2689 | |
| 16 | E | A | -3.0921 | |
| 17 | W | A | 0.0000 | |
| 18 | W | A | 0.0000 | |
| 19 | A | A | -2.1243 | |
| 20 | K | A | -2.5895 | |
| 21 | C | A | 0.0000 | |
| 22 | K | A | -2.1434 | |
| 23 | Q | A | -2.4371 | |
| 24 | V | A | -1.7155 | |
| 25 | D | A | -2.5374 | |
| 26 | V | A | 0.0000 | |
| 27 | L | A | -0.6356 | |
| 28 | D | A | -1.8452 | |
| 29 | S | A | -1.7551 | |
| 30 | E | A | -2.5881 | |
| 31 | M | A | 0.0000 | |
| 32 | S | A | 0.0000 | |
| 33 | Y | A | 0.0000 | |
| 34 | Y | A | 0.0000 | |
| 35 | D | A | 0.0000 | |
| 36 | S | A | -0.8824 | |
| 37 | D | A | -1.3589 | |
| 38 | P | A | -1.3206 | |
| 39 | G | A | -1.8926 | |
| 40 | K | A | -2.9409 | |
| 41 | H | A | -3.2424 | |
| 42 | K | A | -2.8393 | |
| 43 | N | A | -1.7556 | |
| 44 | T | A | 0.0000 | |
| 45 | V | A | 0.0000 | |
| 46 | I | A | 0.0000 | |
| 47 | F | A | 0.0000 | |
| 48 | L | A | 0.0000 | |
| 49 | H | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | N | A | 0.0000 | |
| 52 | P | A | 0.0000 | |
| 53 | T | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | S | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | L | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | N | A | -0.9334 | |
| 61 | V | A | 0.0000 | |
| 62 | I | A | 0.0000 | |
| 63 | P | A | -1.0674 | |
| 64 | H | A | -1.8024 | |
| 65 | V | A | 0.0000 | |
| 66 | E | A | -0.7074 | |
| 67 | P | A | -0.3240 | |
| 68 | L | A | -0.1780 | |
| 69 | A | A | 0.0000 | |
| 70 | R | A | 0.0000 | |
| 71 | C | A | 0.0000 | |
| 72 | L | A | 0.0000 | |
| 73 | A | A | 0.0000 | |
| 74 | P | A | 0.0000 | |
| 75 | D | A | 0.0000 | |
| 76 | L | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | G | A | 0.0000 | |
| 79 | M | A | 0.0000 | |
| 80 | G | A | 0.0000 | |
| 81 | K | A | -1.8463 | |
| 82 | S | A | 0.0000 | |
| 83 | G | A | 0.0000 | |
| 84 | K | A | -1.4769 | |
| 85 | L | A | 0.0000 | |
| 86 | P | A | -1.3001 | |
| 87 | N | A | -1.8077 | |
| 88 | H | A | -1.6427 | |
| 89 | S | A | -1.0324 | |
| 90 | Y | A | 0.0000 | |
| 91 | R | A | -0.6209 | |
| 92 | F | A | 0.0000 | |
| 93 | V | A | 0.1766 | |
| 94 | D | A | -0.6465 | |
| 95 | H | A | 0.0000 | |
| 96 | Y | A | -0.5651 | |
| 97 | R | A | -1.5086 | |
| 98 | Y | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | S | A | -1.0659 | |
| 101 | A | A | -1.0711 | |
| 102 | W | A | 0.0000 | |
| 103 | F | A | 0.0000 | |
| 104 | D | A | -2.0934 | |
| 105 | S | A | -1.5343 | |
| 106 | V | A | 0.0000 | |
| 107 | N | A | -2.3480 | |
| 108 | L | A | -2.2527 | |
| 109 | P | A | 0.0000 | |
| 110 | E | A | -3.1966 | |
| 111 | K | A | -3.0413 | |
| 112 | V | A | 0.0000 | |
| 113 | T | A | 0.0000 | |
| 114 | I | A | 0.0000 | |
| 115 | V | A | 0.0000 | |
| 116 | C | A | 0.0000 | |
| 117 | H | A | 0.0000 | |
| 118 | D | A | 0.0000 | |
| 119 | W | A | 0.0000 | |
| 120 | G | A | 0.0000 | |
| 121 | S | A | 0.0000 | |
| 122 | G | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | G | A | 0.0000 | |
| 125 | F | A | 0.0000 | |
| 126 | H | A | -0.7684 | |
| 127 | W | A | 0.0000 | |
| 128 | C | A | 0.0000 | |
| 129 | N | A | -2.0805 | |
| 130 | E | A | -2.8203 | |
| 131 | H | A | -2.8080 | |
| 132 | R | A | -3.4971 | |
| 133 | D | A | -3.6718 | |
| 134 | R | A | -3.1806 | |
| 135 | V | A | 0.0000 | |
| 136 | K | A | -1.6918 | |
| 137 | G | A | 0.0000 | |
| 138 | I | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | H | A | 0.0000 | |
| 141 | M | A | 0.0000 | |
| 142 | E | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | V | A | 0.2804 | |
| 145 | V | A | 0.0000 | |
| 146 | S | A | -0.5691 | |
| 147 | P | A | 0.0000 | |
| 148 | L | A | -1.3348 | |
| 149 | K | A | -2.5503 | |
| 150 | G | A | -2.0983 | |
| 151 | W | A | -2.0314 | |
| 152 | E | A | -2.7143 | |
| 153 | S | A | -1.6801 | |
| 154 | F | A | 0.0000 | |
| 155 | P | A | -1.6472 | |
| 156 | E | A | -2.5663 | |
| 157 | T | A | -1.4118 | |
| 158 | A | A | -1.5415 | |
| 159 | R | A | -2.7458 | |
| 160 | D | A | -2.7840 | |
| 161 | I | A | -1.2792 | |
| 162 | L | A | 0.0000 | |
| 163 | P | A | -1.3117 | |
| 164 | Q | A | -2.0442 | |
| 165 | A | A | -1.5053 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.1548 | |
| 168 | S | A | -1.5711 | |
| 169 | E | A | -2.4134 | |
| 170 | A | A | -1.7542 | |
| 171 | G | A | 0.0000 | |
| 172 | E | A | -2.3309 | |
| 173 | E | A | -3.0760 | |
| 174 | M | A | -1.8536 | |
| 175 | V | A | 0.0000 | |
| 176 | L | A | 0.0000 | |
| 177 | K | A | -3.2518 | |
| 178 | K | A | -3.0291 | |
| 179 | N | A | 0.0000 | |
| 180 | F | A | -1.2616 | |
| 181 | F | A | -0.4832 | |
| 182 | I | A | 0.0000 | |
| 183 | E | A | -1.6752 | |
| 184 | R | A | -2.1190 | |
| 185 | L | A | -0.7296 | |
| 186 | L | A | 0.0000 | |
| 187 | P | A | -1.1026 | |
| 188 | S | A | -0.8918 | |
| 189 | S | A | -0.3614 | |
| 190 | I | A | 0.0000 | |
| 191 | M | A | -0.5564 | |
| 192 | R | A | -1.5094 | |
| 193 | K | A | -2.3002 | |
| 194 | L | A | 0.0000 | |
| 195 | S | A | -2.3623 | |
| 196 | E | A | -3.5346 | |
| 197 | E | A | -3.6105 | |
| 198 | E | A | 0.0000 | |
| 199 | M | A | 0.0000 | |
| 200 | D | A | -3.3683 | |
| 201 | A | A | 0.0000 | |
| 202 | Y | A | 0.0000 | |
| 203 | R | A | -2.0592 | |
| 204 | E | A | -2.1989 | |
| 205 | P | A | 0.0000 | |
| 206 | F | A | 0.0000 | |
| 207 | V | A | 0.1241 | |
| 208 | E | A | -1.3150 | |
| 209 | P | A | -1.5296 | |
| 210 | G | A | -1.6894 | |
| 211 | E | A | -1.7832 | |
| 212 | S | A | -0.8782 | |
| 213 | R | A | 0.0000 | |
| 214 | R | A | -0.8871 | |
| 215 | P | A | 0.0000 | |
| 216 | T | A | 0.0000 | |
| 217 | L | A | 0.0000 | |
| 218 | T | A | -0.4909 | |
| 219 | W | A | 0.0000 | |
| 220 | P | A | 0.0000 | |
| 221 | R | A | -0.5593 | |
| 222 | E | A | 0.0000 | |
| 223 | I | A | -0.1967 | |
| 224 | P | A | 0.0000 | |
| 225 | I | A | 0.0000 | |
| 226 | K | A | -2.7129 | |
| 227 | G | A | -2.3299 | |
| 228 | D | A | -2.7463 | |
| 229 | G | A | 0.0000 | |
| 230 | P | A | -2.1236 | |
| 231 | E | A | -3.2881 | |
| 232 | D | A | -2.3201 | |
| 233 | V | A | 0.0000 | |
| 234 | I | A | 0.0000 | |
| 235 | E | A | -2.9364 | |
| 236 | I | A | -1.3583 | |
| 237 | V | A | 0.0000 | |
| 238 | K | A | -1.9721 | |
| 239 | S | A | -1.6957 | |
| 240 | Y | A | 0.0000 | |
| 241 | N | A | 0.0000 | |
| 242 | K | A | -1.9507 | |
| 243 | W | A | -1.2856 | |
| 244 | L | A | 0.0000 | |
| 245 | S | A | -1.3582 | |
| 246 | T | A | -1.4884 | |
| 247 | S | A | 0.0000 | |
| 248 | K | A | -2.9490 | |
| 249 | D | A | -2.8403 | |
| 250 | I | A | -2.0115 | |
| 251 | P | A | -1.6271 | |
| 252 | K | A | 0.0000 | |
| 253 | L | A | 0.0000 | |
| 254 | F | A | 0.0000 | |
| 255 | I | A | 0.0000 | |
| 256 | N | A | -1.0357 | |
| 257 | A | A | 0.0000 | |
| 258 | D | A | -2.7006 | |
| 259 | P | A | -1.7512 | |
| 260 | G | A | -1.1150 | |
| 261 | F | A | -0.3485 | |
| 262 | F | A | -0.2193 | |
| 263 | S | A | 0.0000 | |
| 264 | N | A | -1.9202 | |
| 265 | A | A | -1.1554 | |
| 266 | I | A | 0.0000 | |
| 267 | K | A | -2.1856 | |
| 268 | K | A | -2.5930 | |
| 269 | V | A | -0.9912 | |
| 270 | T | A | 0.0000 | |
| 271 | K | A | -2.8429 | |
| 272 | N | A | -2.4845 | |
| 273 | W | A | 0.0000 | |
| 274 | P | A | -2.3105 | |
| 275 | N | A | -2.6907 | |
| 276 | Q | A | -2.1004 | |
| 277 | K | A | -1.5904 | |
| 278 | T | A | -0.7792 | |
| 279 | V | A | -0.1179 | |
| 280 | T | A | -0.9779 | |
| 281 | V | A | 0.0000 | |
| 282 | K | A | -2.6661 | |
| 283 | G | A | 0.0000 | |
| 284 | L | A | -0.4007 | |
| 285 | H | A | 0.0000 | |
| 286 | F | A | 0.0000 | |
| 287 | L | A | 0.0000 | |
| 288 | Q | A | 0.0000 | |
| 289 | E | A | 0.0000 | |
| 290 | D | A | -1.3912 | |
| 291 | S | A | -1.7533 | |
| 292 | P | A | -2.2026 | |
| 293 | E | A | -3.4164 | |
| 294 | E | A | -3.5904 | |
| 295 | I | A | 0.0000 | |
| 296 | G | A | 0.0000 | |
| 297 | E | A | -3.4996 | |
| 298 | A | A | -2.3545 | |
| 299 | I | A | 0.0000 | |
| 300 | A | A | -2.3586 | |
| 301 | D | A | -3.1426 | |
| 302 | F | A | 0.0000 | |
| 303 | L | A | 0.0000 | |
| 304 | N | A | -2.5904 | |
| 305 | E | A | -2.7487 | |
| 306 | L | A | -1.2945 | |
| 307 | T | A | -0.9735 |