| Chain sequence(s) |
A: FEFEFKFK
C: FEFEFKFK B: FEFEFKFK E: FEFEFKFK D: FEFEFKFK G: FEFEFKFK F: FEFEFKFK H: FEFEFKFK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:37)
[INFO] Main: Simulation completed successfully. (00:06:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.1627 | |
| 2 | E | A | -1.2370 | |
| 3 | F | A | -0.7538 | |
| 4 | E | A | -1.9923 | |
| 5 | F | A | -0.7980 | |
| 6 | K | A | -2.0805 | |
| 7 | F | A | -0.6296 | |
| 8 | K | A | -1.6926 | |
| 1 | F | B | 1.1357 | |
| 2 | E | B | -1.5866 | |
| 3 | F | B | -1.0676 | |
| 4 | E | B | -2.4727 | |
| 5 | F | B | -0.9202 | |
| 6 | K | B | -1.7060 | |
| 7 | F | B | -0.1783 | |
| 8 | K | B | -1.4970 | |
| 1 | F | C | 1.5448 | |
| 2 | E | C | -0.5294 | |
| 3 | F | C | 0.2113 | |
| 4 | E | C | -1.3537 | |
| 5 | F | C | -0.3966 | |
| 6 | K | C | -2.1827 | |
| 7 | F | C | -0.8277 | |
| 8 | K | C | -1.8493 | |
| 1 | F | D | 1.2957 | |
| 2 | E | D | -0.8880 | |
| 3 | F | D | 0.2484 | |
| 4 | E | D | -1.5144 | |
| 5 | F | D | 0.5191 | |
| 6 | K | D | -0.9046 | |
| 7 | F | D | 1.0223 | |
| 8 | K | D | -0.9341 | |
| 1 | F | E | 1.3904 | |
| 2 | E | E | -0.9574 | |
| 3 | F | E | -0.4049 | |
| 4 | E | E | -1.8289 | |
| 5 | F | E | -1.0228 | |
| 6 | K | E | -2.1196 | |
| 7 | F | E | -0.7458 | |
| 8 | K | E | -1.7726 | |
| 1 | F | F | 1.1864 | |
| 2 | E | F | -1.3133 | |
| 3 | F | F | -0.7435 | |
| 4 | E | F | -2.4048 | |
| 5 | F | F | -0.7672 | |
| 6 | K | F | -2.0070 | |
| 7 | F | F | -0.2586 | |
| 8 | K | F | -1.5311 | |
| 1 | F | G | 1.2188 | |
| 2 | E | G | -0.9952 | |
| 3 | F | G | 0.6423 | |
| 4 | E | G | -1.3954 | |
| 5 | F | G | 0.4058 | |
| 6 | K | G | -1.2342 | |
| 7 | F | G | 0.7684 | |
| 8 | K | G | -1.0528 | |
| 1 | F | H | 1.4749 | |
| 2 | E | H | -0.5229 | |
| 3 | F | H | -0.1217 | |
| 4 | E | H | -1.6362 | |
| 5 | F | H | -0.4511 | |
| 6 | K | H | -1.8310 | |
| 7 | F | H | -0.4062 | |
| 8 | K | H | -1.5964 |