Project name: query_structure

Status: done

Started: 2026-03-17 00:14:56
Settings
Chain sequence(s) A: NAINAINAINAINAINAINAINAI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:05)
Show buried residues

Minimal score value
-0.8438
Maximal score value
2.2975
Average score
0.769
Total score value
18.457

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -0.8438
2 A A 0.2559
3 I A 1.4336
4 N A -0.3945
5 A A 0.3976
6 I A 1.5399
7 N A -0.0385
8 A A 0.6097
9 I A 1.7715
10 N A -0.0741
11 A A 0.5902
12 I A 1.8029
13 N A -0.0150
14 A A 0.6059
15 I A 1.8457
16 N A -0.1054
17 A A 0.6623
18 I A 1.7382
19 N A 0.0954
20 A A 0.9375
21 I A 2.2975
22 N A 0.2660
23 A A 0.9459
24 I A 2.1326
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Laboratory of Theory of Biopolymers 2018