| Chain sequence(s) |
A: GPLPLNPGPALRPTSEYVTPTDLLYVAETDLITETGDPTKDIVKDGKVEKKRVSAYQWRVFKLTLPDPNTLPLPTEDAIDFSTERLIWRLLAFEIKVYGPLGKGTYGHPNFNKLGDVENPTAPVHCGTDDTQNLSWEPKLLQEYIIGDEPPLGVYTAPAPPAPGLPPGAPLPVEKVRTIIQDGDMADIGYGARDYAELDPEKNNVPEIILNTKTVVPDYEGMLAEEYGNRLFTHDRKESSKDVKKYVRCGPQLFPPPAAPPPPPLYTPPPATSPTAVPPPTDYFTLPDGGEITEEDELFNKPIFLEQTPGLNQGILHHNQLYVTVLDNTRAEIETKTTQLKTRAPKVYDPSDYKTSKTYTREYKLSLILQLCKIPLTPETLEYLRRLDPSILVDWNLPFVPPVQRPDPYAGLKFKEIDLTDKLSSELEKYELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2048 | |
| 2 | P | A | 0.4150 | |
| 3 | L | A | 1.3882 | |
| 4 | P | A | 0.6959 | |
| 5 | L | A | 1.0550 | |
| 6 | N | A | -0.6680 | |
| 7 | P | A | -0.7482 | |
| 8 | G | A | -0.9335 | |
| 9 | P | A | -0.8981 | |
| 10 | A | A | -0.1740 | |
| 11 | L | A | -0.3373 | |
| 12 | R | A | -1.2768 | |
| 13 | P | A | -0.8997 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.3036 | |
| 16 | E | A | -2.1545 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6295 | |
| 20 | P | A | -0.7463 | |
| 21 | T | A | -0.9249 | |
| 22 | D | A | -1.6333 | |
| 23 | L | A | -0.5315 | |
| 24 | L | A | -0.2658 | |
| 25 | Y | A | -0.1724 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.6926 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2491 | |
| 31 | L | A | 0.3479 | |
| 32 | I | A | 0.0917 | |
| 33 | T | A | -0.1241 | |
| 34 | E | A | -0.4729 | |
| 35 | T | A | -0.8200 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | -1.8178 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.4921 | |
| 40 | K | A | -2.5820 | |
| 41 | D | A | -2.7002 | |
| 42 | I | A | -1.3606 | |
| 43 | V | A | -0.9345 | |
| 44 | K | A | -2.7044 | |
| 45 | D | A | -2.9633 | |
| 46 | G | A | -2.0250 | |
| 47 | K | A | -2.4826 | |
| 48 | V | A | -1.3449 | |
| 49 | E | A | -3.0278 | |
| 50 | K | A | -3.4307 | |
| 51 | K | A | -3.1265 | |
| 52 | R | A | -2.5294 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.1907 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.6947 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.3984 | |
| 70 | T | A | -0.2126 | |
| 71 | L | A | -0.0142 | |
| 72 | P | A | -0.3327 | |
| 73 | L | A | -0.5154 | |
| 74 | P | A | -0.8062 | |
| 75 | T | A | -1.5500 | |
| 76 | E | A | -2.8705 | |
| 77 | D | A | -2.8199 | |
| 78 | A | A | -1.3813 | |
| 79 | I | A | -1.1505 | |
| 80 | D | A | -1.5805 | |
| 81 | F | A | -0.0462 | |
| 82 | S | A | -0.3745 | |
| 83 | T | A | -0.4815 | |
| 84 | E | A | -0.6431 | |
| 85 | R | A | -0.4380 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.4146 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.2499 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | E | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.6629 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | 0.1664 | |
| 99 | G | A | -0.5096 | |
| 100 | P | A | -0.4763 | |
| 101 | L | A | -0.4044 | |
| 102 | G | A | -0.9742 | |
| 103 | K | A | -1.4306 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.7526 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8771 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.6424 | |
| 110 | N | A | -2.6162 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | K | A | -1.0433 | |
| 114 | L | A | -0.3991 | |
| 115 | G | A | -0.6963 | |
| 116 | D | A | -1.5299 | |
| 117 | V | A | -1.1542 | |
| 118 | E | A | -2.1937 | |
| 119 | N | A | -2.2517 | |
| 120 | P | A | -1.2424 | |
| 121 | T | A | -0.6570 | |
| 122 | A | A | -0.3789 | |
| 123 | P | A | -0.1836 | |
| 124 | V | A | 0.0557 | |
| 125 | H | A | -0.2136 | |
| 126 | C | A | -0.5415 | |
| 127 | G | A | -1.0998 | |
| 128 | T | A | -1.1988 | |
| 129 | D | A | -2.4111 | |
| 130 | D | A | -1.9008 | |
| 131 | T | A | -1.9833 | |
| 132 | Q | A | -2.1149 | |
| 133 | N | A | -2.0679 | |
| 134 | L | A | -1.0680 | |
| 135 | S | A | -0.7412 | |
| 136 | W | A | 0.0000 | |
| 137 | E | A | -0.8543 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -1.3265 | |
| 140 | L | A | -1.3556 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.4554 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.3341 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | -0.5987 | |
| 155 | Y | A | -1.1285 | |
| 156 | T | A | -1.0420 | |
| 157 | A | A | -0.6521 | |
| 158 | P | A | -0.1146 | |
| 159 | A | A | 0.0858 | |
| 160 | P | A | -0.1604 | |
| 161 | P | A | 0.0171 | |
| 162 | A | A | -0.1173 | |
| 163 | P | A | -0.3805 | |
| 164 | G | A | -0.3673 | |
| 165 | L | A | 0.2135 | |
| 166 | P | A | -0.3555 | |
| 167 | P | A | -0.4195 | |
| 168 | G | A | -0.2622 | |
| 169 | A | A | 0.0968 | |
| 170 | P | A | 0.5006 | |
| 171 | L | A | 0.9816 | |
| 172 | P | A | 0.8298 | |
| 173 | V | A | 0.9465 | |
| 174 | E | A | -1.2858 | |
| 175 | K | A | -2.0977 | |
| 176 | V | A | -1.3671 | |
| 177 | R | A | -1.9178 | |
| 178 | T | A | -0.7235 | |
| 179 | I | A | -0.2797 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.8724 | |
| 182 | D | A | -1.2359 | |
| 183 | G | A | -1.0454 | |
| 184 | D | A | -0.9276 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.4470 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.8300 | |
| 190 | Y | A | -0.2095 | |
| 191 | G | A | -0.4282 | |
| 192 | A | A | -0.6555 | |
| 193 | R | A | -1.2108 | |
| 194 | D | A | 0.0000 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -2.0993 | |
| 197 | E | A | -2.4253 | |
| 198 | L | A | -1.0874 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -1.9477 | |
| 201 | E | A | -2.4083 | |
| 202 | K | A | -2.8167 | |
| 203 | N | A | -1.9385 | |
| 204 | N | A | -1.2640 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | E | A | -1.4877 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.3568 | |
| 211 | N | A | -2.0107 | |
| 212 | T | A | -1.5264 | |
| 213 | K | A | -1.8313 | |
| 214 | T | A | 0.0000 | |
| 215 | V | A | 0.0000 | |
| 216 | V | A | 0.2339 | |
| 217 | P | A | -0.1319 | |
| 218 | D | A | -0.5296 | |
| 219 | Y | A | -0.4311 | |
| 220 | E | A | -1.3838 | |
| 221 | G | A | -0.8210 | |
| 222 | M | A | 0.0000 | |
| 223 | L | A | 0.2439 | |
| 224 | A | A | -0.5045 | |
| 225 | E | A | -1.0766 | |
| 226 | E | A | -1.6354 | |
| 227 | Y | A | -0.6458 | |
| 228 | G | A | 0.0000 | |
| 229 | N | A | -0.4474 | |
| 230 | R | A | -0.2270 | |
| 231 | L | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.6960 | |
| 234 | H | A | -1.1275 | |
| 235 | D | A | -2.0673 | |
| 236 | R | A | -3.1885 | |
| 237 | K | A | -3.1116 | |
| 238 | E | A | -2.7917 | |
| 239 | S | A | -1.8715 | |
| 240 | S | A | -2.0444 | |
| 241 | K | A | -2.3533 | |
| 242 | D | A | -2.6032 | |
| 243 | V | A | -1.2702 | |
| 244 | K | A | -2.0811 | |
| 245 | K | A | -2.0034 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | C | A | -0.6440 | |
| 250 | G | A | -0.7032 | |
| 251 | P | A | -0.0814 | |
| 252 | Q | A | 0.4366 | |
| 253 | L | A | 1.7443 | |
| 254 | F | A | 2.0539 | |
| 255 | P | A | 0.5810 | |
| 256 | P | A | 0.6570 | |
| 257 | P | A | 0.3067 | |
| 258 | A | A | 0.2307 | |
| 259 | A | A | 0.1042 | |
| 260 | P | A | 0.2377 | |
| 261 | P | A | -0.0588 | |
| 262 | P | A | -0.3054 | |
| 263 | P | A | -0.1139 | |
| 264 | P | A | 0.3698 | |
| 265 | L | A | 1.4810 | |
| 266 | Y | A | 1.0343 | |
| 267 | T | A | 0.3031 | |
| 268 | P | A | 0.1432 | |
| 269 | P | A | -0.0881 | |
| 270 | P | A | -0.3997 | |
| 271 | A | A | 0.0594 | |
| 272 | T | A | -0.0398 | |
| 273 | S | A | -0.0464 | |
| 274 | P | A | -0.0599 | |
| 275 | T | A | 0.2373 | |
| 276 | A | A | 0.6138 | |
| 277 | V | A | 1.5259 | |
| 278 | P | A | 0.5397 | |
| 279 | P | A | -0.0509 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.3163 | |
| 282 | D | A | -1.0159 | |
| 283 | Y | A | 0.1820 | |
| 284 | F | A | -0.2096 | |
| 285 | T | A | -0.9613 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.6909 | |
| 289 | G | A | 0.0000 | |
| 290 | G | A | -1.6133 | |
| 291 | E | A | -1.9787 | |
| 292 | I | A | -1.5727 | |
| 293 | T | A | -2.2502 | |
| 294 | E | A | -3.1420 | |
| 295 | E | A | -3.4992 | |
| 296 | D | A | -3.3806 | |
| 297 | E | A | -2.4271 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3845 | |
| 301 | K | A | -1.6917 | |
| 302 | P | A | -0.6919 | |
| 303 | I | A | -0.1245 | |
| 304 | F | A | -0.3474 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.2393 | |
| 307 | Q | A | -2.0819 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -0.2196 | |
| 310 | G | A | -0.3882 | |
| 311 | L | A | -0.6408 | |
| 312 | N | A | 0.0000 | |
| 313 | Q | A | -0.8099 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | H | A | 0.0000 | |
| 318 | H | A | -0.5076 | |
| 319 | N | A | -0.5758 | |
| 320 | Q | A | -0.6214 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.1923 | |
| 333 | I | A | -1.7401 | |
| 334 | E | A | -2.4926 | |
| 335 | T | A | -2.1243 | |
| 336 | K | A | -2.6218 | |
| 337 | T | A | -1.4730 | |
| 338 | T | A | -1.0378 | |
| 339 | Q | A | -0.8352 | |
| 340 | L | A | -0.0891 | |
| 341 | K | A | -1.6371 | |
| 342 | T | A | -1.4981 | |
| 343 | R | A | -2.4731 | |
| 344 | A | A | -1.1726 | |
| 345 | P | A | -0.7831 | |
| 346 | K | A | -0.9216 | |
| 347 | V | A | 1.3321 | |
| 348 | Y | A | 1.2840 | |
| 349 | D | A | -0.2027 | |
| 350 | P | A | -0.5393 | |
| 351 | S | A | -0.6577 | |
| 352 | D | A | 0.0000 | |
| 353 | Y | A | -0.7846 | |
| 354 | K | A | -1.7381 | |
| 355 | T | A | -1.7225 | |
| 356 | S | A | -1.8194 | |
| 357 | K | A | -1.7293 | |
| 358 | T | A | -1.4801 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.7003 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.1910 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.4921 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | L | A | 0.0000 | |
| 370 | Q | A | -0.4079 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.5398 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.5661 | |
| 376 | L | A | -0.3441 | |
| 377 | T | A | -0.7690 | |
| 378 | P | A | -1.1858 | |
| 379 | E | A | -2.1702 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.2335 | |
| 382 | E | A | -1.9648 | |
| 383 | Y | A | -1.7099 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -2.5245 | |
| 386 | R | A | -2.4898 | |
| 387 | L | A | -1.4431 | |
| 388 | D | A | -1.3397 | |
| 389 | P | A | -1.4568 | |
| 390 | S | A | -0.8828 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.3672 | |
| 394 | D | A | -0.9417 | |
| 395 | W | A | 0.0000 | |
| 396 | N | A | -0.9572 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.3895 | |
| 399 | F | A | 1.7011 | |
| 400 | V | A | 0.9329 | |
| 401 | P | A | 0.4309 | |
| 402 | P | A | 0.1615 | |
| 403 | V | A | 0.7165 | |
| 404 | Q | A | -0.9065 | |
| 405 | R | A | -1.2116 | |
| 406 | P | A | -1.2068 | |
| 407 | D | A | -1.6133 | |
| 408 | P | A | -0.8650 | |
| 409 | Y | A | -0.5621 | |
| 410 | A | A | -0.7103 | |
| 411 | G | A | -0.7010 | |
| 412 | L | A | -0.6184 | |
| 413 | K | A | -1.9814 | |
| 414 | F | A | -1.4982 | |
| 415 | K | A | -1.9911 | |
| 416 | E | A | -2.6443 | |
| 417 | I | A | -1.9098 | |
| 418 | D | A | -2.6168 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5889 | |
| 421 | D | A | -2.2678 | |
| 422 | K | A | -1.7874 | |
| 423 | L | A | -0.6930 | |
| 424 | S | A | -0.8887 | |
| 425 | S | A | -1.0435 | |
| 426 | E | A | -2.4181 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.6386 | |
| 429 | K | A | -3.4296 | |
| 430 | Y | A | -2.3029 | |
| 431 | E | A | -2.1408 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -3.0645 | |
| 435 | L | A | -1.3363 | |
| 436 | Y | A | -0.7046 | |
| 437 | L | A | -0.6359 | |
| 438 | N | A | -1.9779 | |
| 439 | R | A | -2.0483 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine