Project name: Pronoy Majumder

Status: done

Started: 2025-12-27 07:27:27
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Chain sequence(s) A: MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:07)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:07)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:07)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:07)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:07)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:13)
Show buried residues

Minimal score value
-4.1768
Maximal score value
1.4683
Average score
-1.2133
Total score value
-118.903

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 M A 1.2573
1 I A 0.5803
2 Q A -0.8614
3 R A -1.5554
4 T A -1.0376
5 P A 0.0000
6 K A -1.8840
7 I A -1.0821
8 Q A -1.2985
9 V A 0.0000
10 Y A -1.1180
11 S A -1.5964
12 R A -2.4801
13 H A -2.9819
14 P A -2.0949
15 A A -1.8837
16 E A -2.5156
17 N A -2.3340
18 G A -2.6057
19 K A -2.5641
20 S A -2.3230
21 N A -2.0593
22 F A -1.3091
23 L A 0.0000
24 N A 0.0000
25 C A 0.0000
26 Y A 0.1934
27 V A 0.0000
28 S A -0.1304
29 G A -0.4666
30 F A 0.0000
31 H A -0.5269
32 P A -0.6231
33 S A -0.7012
34 D A -1.6858
35 I A -1.0335
36 E A -2.0865
37 V A -1.3154
38 D A -1.9344
39 L A 0.0000
40 L A 0.0000
41 K A -3.0769
42 N A -3.5371
43 G A -2.9643
44 E A -3.7701
45 R A -3.9735
46 I A -2.8072
47 E A -3.3570
48 K A -3.0906
49 V A -2.0695
50 E A -2.0118
51 H A -1.3723
52 S A -0.6991
53 D A -0.8001
54 L A 0.9920
55 S A 0.8658
56 F A 1.4683
57 S A -0.2784
58 K A -1.7397
59 D A -1.7697
60 W A -0.4051
61 S A 0.0000
62 F A 0.6443
63 Y A 1.0837
64 L A 0.0000
65 L A 0.2952
66 Y A 0.0740
67 Y A -0.7318
68 T A 0.0000
69 E A -2.2020
70 F A 0.0000
71 T A -0.6567
72 P A -1.6832
73 T A -2.1298
74 E A -3.3785
75 K A -3.5462
76 D A -3.3544
77 E A -4.1768
78 Y A 0.0000
79 A A 0.0000
80 C A 0.0000
81 R A -1.9568
82 V A 0.0000
83 N A -1.3699
84 H A 0.0000
85 V A 0.7750
86 T A 0.1424
87 L A -0.2263
88 S A -0.5457
89 Q A -1.3011
90 P A -1.3217
91 K A -1.3441
92 I A -0.5673
93 V A -0.9699
94 K A -2.6689
95 W A -2.4493
96 D A -3.2230
97 R A -3.6603
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Laboratory of Theory of Biopolymers 2018