| Chain sequence(s) |
A: MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:07)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:07)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:07)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:07)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:07)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:12)
[INFO] Main: Simulation completed successfully. (00:02:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | M | A | 1.2573 | |
| 1 | I | A | 0.5803 | |
| 2 | Q | A | -0.8614 | |
| 3 | R | A | -1.5554 | |
| 4 | T | A | -1.0376 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -1.8840 | |
| 7 | I | A | -1.0821 | |
| 8 | Q | A | -1.2985 | |
| 9 | V | A | 0.0000 | |
| 10 | Y | A | -1.1180 | |
| 11 | S | A | -1.5964 | |
| 12 | R | A | -2.4801 | |
| 13 | H | A | -2.9819 | |
| 14 | P | A | -2.0949 | |
| 15 | A | A | -1.8837 | |
| 16 | E | A | -2.5156 | |
| 17 | N | A | -2.3340 | |
| 18 | G | A | -2.6057 | |
| 19 | K | A | -2.5641 | |
| 20 | S | A | -2.3230 | |
| 21 | N | A | -2.0593 | |
| 22 | F | A | -1.3091 | |
| 23 | L | A | 0.0000 | |
| 24 | N | A | 0.0000 | |
| 25 | C | A | 0.0000 | |
| 26 | Y | A | 0.1934 | |
| 27 | V | A | 0.0000 | |
| 28 | S | A | -0.1304 | |
| 29 | G | A | -0.4666 | |
| 30 | F | A | 0.0000 | |
| 31 | H | A | -0.5269 | |
| 32 | P | A | -0.6231 | |
| 33 | S | A | -0.7012 | |
| 34 | D | A | -1.6858 | |
| 35 | I | A | -1.0335 | |
| 36 | E | A | -2.0865 | |
| 37 | V | A | -1.3154 | |
| 38 | D | A | -1.9344 | |
| 39 | L | A | 0.0000 | |
| 40 | L | A | 0.0000 | |
| 41 | K | A | -3.0769 | |
| 42 | N | A | -3.5371 | |
| 43 | G | A | -2.9643 | |
| 44 | E | A | -3.7701 | |
| 45 | R | A | -3.9735 | |
| 46 | I | A | -2.8072 | |
| 47 | E | A | -3.3570 | |
| 48 | K | A | -3.0906 | |
| 49 | V | A | -2.0695 | |
| 50 | E | A | -2.0118 | |
| 51 | H | A | -1.3723 | |
| 52 | S | A | -0.6991 | |
| 53 | D | A | -0.8001 | |
| 54 | L | A | 0.9920 | |
| 55 | S | A | 0.8658 | |
| 56 | F | A | 1.4683 | |
| 57 | S | A | -0.2784 | |
| 58 | K | A | -1.7397 | |
| 59 | D | A | -1.7697 | |
| 60 | W | A | -0.4051 | |
| 61 | S | A | 0.0000 | |
| 62 | F | A | 0.6443 | |
| 63 | Y | A | 1.0837 | |
| 64 | L | A | 0.0000 | |
| 65 | L | A | 0.2952 | |
| 66 | Y | A | 0.0740 | |
| 67 | Y | A | -0.7318 | |
| 68 | T | A | 0.0000 | |
| 69 | E | A | -2.2020 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.6567 | |
| 72 | P | A | -1.6832 | |
| 73 | T | A | -2.1298 | |
| 74 | E | A | -3.3785 | |
| 75 | K | A | -3.5462 | |
| 76 | D | A | -3.3544 | |
| 77 | E | A | -4.1768 | |
| 78 | Y | A | 0.0000 | |
| 79 | A | A | 0.0000 | |
| 80 | C | A | 0.0000 | |
| 81 | R | A | -1.9568 | |
| 82 | V | A | 0.0000 | |
| 83 | N | A | -1.3699 | |
| 84 | H | A | 0.0000 | |
| 85 | V | A | 0.7750 | |
| 86 | T | A | 0.1424 | |
| 87 | L | A | -0.2263 | |
| 88 | S | A | -0.5457 | |
| 89 | Q | A | -1.3011 | |
| 90 | P | A | -1.3217 | |
| 91 | K | A | -1.3441 | |
| 92 | I | A | -0.5673 | |
| 93 | V | A | -0.9699 | |
| 94 | K | A | -2.6689 | |
| 95 | W | A | -2.4493 | |
| 96 | D | A | -3.2230 | |
| 97 | R | A | -3.6603 |