| Chain sequence(s) |
A: MGSSLDDFCNDSTAPQKVLLAFSITYTPVMIYALKVSRGRLLGLLHLLIFLNCAFTFGYMTFVHFESTNRVALTMGAVVALLWGVYSAIETWKFITSRCRLCLLGRKYILAPAHHVESAAGFHPIAANDNHAFVVRRPGSTTVQGTLVPGLKSLVLGGRKAVKQGVVNLVKYAK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LK82A,FK133A,FK22A,VK167A,FK62A |
| Energy difference between WT (input) and mutated protein (by FoldX) | -0.111627 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:01:11)
[INFO] FoldX: Starting FoldX energy minimalization (00:03:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:37)
[INFO] Main: Simulation completed successfully. (00:04:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7606 | |
| 2 | G | A | 0.1133 | |
| 3 | S | A | -0.3882 | |
| 4 | S | A | -0.3396 | |
| 5 | L | A | 0.3244 | |
| 6 | D | A | -1.7660 | |
| 7 | D | A | -2.0620 | |
| 8 | F | A | -0.2934 | |
| 9 | C | A | -0.3977 | |
| 10 | N | A | -1.7339 | |
| 11 | D | A | -1.5217 | |
| 12 | S | A | -0.7805 | |
| 13 | T | A | -0.6668 | |
| 14 | A | A | -0.5419 | |
| 15 | P | A | -0.2544 | |
| 16 | Q | A | -0.8445 | |
| 17 | K | A | -0.8078 | |
| 18 | V | A | 0.0386 | |
| 19 | L | A | 0.3958 | |
| 20 | L | A | 0.0000 | |
| 21 | A | A | 0.1387 | |
| 22 | K | A | -0.5381 | mutated: FK22A |
| 23 | S | A | 0.0000 | |
| 24 | I | A | 1.6775 | |
| 25 | T | A | 1.0845 | |
| 26 | Y | A | 1.8994 | |
| 27 | T | A | 1.6964 | |
| 28 | P | A | 1.8152 | |
| 29 | V | A | 2.6570 | |
| 30 | M | A | 0.0000 | |
| 31 | I | A | 1.8115 | |
| 32 | Y | A | 2.1220 | |
| 33 | A | A | 1.3099 | |
| 34 | L | A | 0.7137 | |
| 35 | K | A | -0.4707 | |
| 36 | V | A | 1.0765 | |
| 37 | S | A | 0.0000 | |
| 38 | R | A | -1.8761 | |
| 39 | G | A | -1.5260 | |
| 40 | R | A | -1.0894 | |
| 41 | L | A | 0.5751 | |
| 42 | L | A | 0.2565 | |
| 43 | G | A | 0.8948 | |
| 44 | L | A | 2.0866 | |
| 45 | L | A | 0.0000 | |
| 46 | H | A | 0.0000 | |
| 47 | L | A | 2.1694 | |
| 48 | L | A | 2.1112 | |
| 49 | I | A | 0.0000 | |
| 50 | F | A | 2.1506 | |
| 51 | L | A | 2.3482 | |
| 52 | N | A | 1.6132 | |
| 53 | C | A | 1.5229 | |
| 54 | A | A | 1.4580 | |
| 55 | F | A | 1.3782 | |
| 56 | T | A | 1.1206 | |
| 57 | F | A | 0.7004 | |
| 58 | G | A | 0.0142 | |
| 59 | Y | A | 0.0000 | |
| 60 | M | A | 0.1632 | |
| 61 | T | A | -0.3414 | |
| 62 | K | A | -1.3807 | mutated: FK62A |
| 63 | V | A | -0.1691 | |
| 64 | H | A | -0.5432 | |
| 65 | F | A | -0.3900 | |
| 66 | E | A | -1.9351 | |
| 67 | S | A | -1.7532 | |
| 68 | T | A | -1.1753 | |
| 69 | N | A | -1.6179 | |
| 70 | R | A | -1.4628 | |
| 71 | V | A | 0.8311 | |
| 72 | A | A | 0.4580 | |
| 73 | L | A | 0.6829 | |
| 74 | T | A | 0.8914 | |
| 75 | M | A | 2.0743 | |
| 76 | G | A | 1.4717 | |
| 77 | A | A | 1.6860 | |
| 78 | V | A | 1.9805 | |
| 79 | V | A | 2.3716 | |
| 80 | A | A | 1.9428 | |
| 81 | L | A | 2.1619 | |
| 82 | K | A | 0.5880 | mutated: LK82A |
| 83 | W | A | 1.4226 | |
| 84 | G | A | 1.8714 | |
| 85 | V | A | 2.0508 | |
| 86 | Y | A | 1.8213 | |
| 87 | S | A | 0.0000 | |
| 88 | A | A | 1.4360 | |
| 89 | I | A | 1.9533 | |
| 90 | E | A | 0.9183 | |
| 91 | T | A | 1.6885 | |
| 92 | W | A | 1.7472 | |
| 93 | K | A | 0.3193 | |
| 94 | F | A | 1.2059 | |
| 95 | I | A | 2.2812 | |
| 96 | T | A | 0.9926 | |
| 97 | S | A | 0.4079 | |
| 98 | R | A | 1.1815 | |
| 99 | C | A | 1.4464 | |
| 100 | R | A | 0.3251 | |
| 101 | L | A | 0.0000 | |
| 102 | C | A | 0.8996 | |
| 103 | L | A | 1.4403 | |
| 104 | L | A | 0.1134 | |
| 105 | G | A | -0.6233 | |
| 106 | R | A | -1.8291 | |
| 107 | K | A | -1.9772 | |
| 108 | Y | A | 0.0000 | |
| 109 | I | A | 0.7527 | |
| 110 | L | A | 1.1182 | |
| 111 | A | A | 0.0000 | |
| 112 | P | A | -0.3304 | |
| 113 | A | A | -0.5048 | |
| 114 | H | A | -1.3809 | |
| 115 | H | A | 0.0000 | |
| 116 | V | A | 0.0000 | |
| 117 | E | A | 0.0000 | |
| 118 | S | A | 0.0000 | |
| 119 | A | A | -0.4043 | |
| 120 | A | A | -0.0423 | |
| 121 | G | A | -0.2184 | |
| 122 | F | A | 0.3540 | |
| 123 | H | A | -0.3146 | |
| 124 | P | A | -0.4206 | |
| 125 | I | A | 0.0000 | |
| 126 | A | A | -0.7636 | |
| 127 | A | A | -2.0261 | |
| 128 | N | A | -2.5801 | |
| 129 | D | A | -3.3720 | |
| 130 | N | A | -3.1808 | |
| 131 | H | A | -2.7761 | |
| 132 | A | A | -2.0206 | |
| 133 | K | A | -1.8952 | mutated: FK133A |
| 134 | V | A | -0.6487 | |
| 135 | V | A | -0.7019 | |
| 136 | R | A | -2.1879 | |
| 137 | R | A | -1.9942 | |
| 138 | P | A | -1.4058 | |
| 139 | G | A | -1.2627 | |
| 140 | S | A | -0.8827 | |
| 141 | T | A | 0.0000 | |
| 142 | T | A | -0.2061 | |
| 143 | V | A | 0.0000 | |
| 144 | Q | A | -1.1075 | |
| 145 | G | A | -0.5409 | |
| 146 | T | A | 0.3215 | |
| 147 | L | A | 1.2730 | |
| 148 | V | A | 0.0000 | |
| 149 | P | A | -0.2902 | |
| 150 | G | A | -0.7508 | |
| 151 | L | A | -0.6876 | |
| 152 | K | A | -1.6790 | |
| 153 | S | A | -0.8924 | |
| 154 | L | A | -0.6237 | |
| 155 | V | A | 0.0000 | |
| 156 | L | A | 0.0000 | |
| 157 | G | A | -2.0072 | |
| 158 | G | A | 0.0000 | |
| 159 | R | A | -2.3007 | |
| 160 | K | A | -1.9051 | |
| 161 | A | A | -1.1212 | |
| 162 | V | A | 0.0010 | |
| 163 | K | A | -1.4863 | |
| 164 | Q | A | -1.5591 | |
| 165 | G | A | -1.0435 | |
| 166 | V | A | 0.1324 | |
| 167 | K | A | -1.0642 | mutated: VK167A |
| 168 | N | A | -0.6374 | |
| 169 | L | A | 1.2155 | |
| 170 | V | A | 1.4966 | |
| 171 | K | A | -0.1119 | |
| 172 | Y | A | 0.7416 | |
| 173 | A | A | -0.3785 | |
| 174 | K | A | -1.5348 |