| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYAWVRQAPGKGLEWVSISYNGGRKREFTISRDNSKNTLYLQMNSLRAEDTAVYYCARARIYYGSSYFDYWWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:54)
[INFO] Main: Simulation completed successfully. (00:01:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9426 | |
| 2 | V | A | -0.9450 | |
| 3 | Q | A | -0.9972 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.9952 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.1965 | |
| 8 | G | A | -0.5924 | |
| 9 | G | A | 0.1386 | |
| 10 | G | A | 0.6861 | |
| 11 | L | A | 1.3340 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.3665 | |
| 14 | P | A | -1.5915 | |
| 15 | G | A | -1.3710 | |
| 16 | G | A | -0.9456 | |
| 17 | S | A | -1.2827 | |
| 18 | L | A | -0.9901 | |
| 19 | R | A | -1.9304 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4908 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1183 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.6145 | |
| 26 | G | A | -0.4986 | |
| 27 | F | A | 0.8810 | |
| 28 | T | A | 0.1930 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.0165 | |
| 31 | N | A | 0.2665 | |
| 32 | Y | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | W | A | 0.0000 | |
| 35 | V | A | 0.0000 | |
| 36 | R | A | -0.1048 | |
| 37 | Q | A | -0.6144 | |
| 38 | A | A | -1.1301 | |
| 39 | P | A | -1.0588 | |
| 40 | G | A | -1.4647 | |
| 41 | K | A | -2.1861 | |
| 42 | G | A | -1.0537 | |
| 43 | L | A | 0.2428 | |
| 44 | E | A | -0.2328 | |
| 45 | W | A | 0.5347 | |
| 46 | V | A | 0.0000 | |
| 47 | S | A | 0.0000 | |
| 48 | I | A | 0.8933 | |
| 49 | S | A | 0.3652 | |
| 50 | Y | A | 0.8623 | |
| 51 | N | A | -0.8767 | |
| 52 | G | A | -1.4461 | |
| 53 | G | A | -1.9615 | |
| 54 | R | A | -3.3270 | |
| 55 | K | A | -2.9231 | |
| 56 | R | A | -2.3839 | |
| 57 | E | A | -2.0576 | |
| 58 | F | A | 0.0000 | |
| 59 | T | A | -1.3757 | |
| 60 | I | A | -0.6941 | |
| 61 | S | A | -1.1627 | |
| 62 | R | A | -2.5207 | |
| 63 | D | A | -2.4961 | |
| 64 | N | A | -2.7133 | |
| 65 | S | A | -2.0948 | |
| 66 | K | A | -2.7073 | |
| 67 | N | A | -1.9420 | |
| 68 | T | A | 0.0000 | |
| 69 | L | A | 0.0000 | |
| 70 | Y | A | -0.8733 | |
| 71 | L | A | 0.0000 | |
| 72 | Q | A | -1.1783 | |
| 73 | M | A | 0.0000 | |
| 74 | N | A | -1.5037 | |
| 75 | S | A | -1.3187 | |
| 76 | L | A | 0.0000 | |
| 77 | R | A | -2.1393 | |
| 78 | A | A | -1.6868 | |
| 79 | E | A | -2.1866 | |
| 80 | D | A | 0.0000 | |
| 81 | T | A | -0.4458 | |
| 82 | A | A | 0.0000 | |
| 83 | V | A | 0.7128 | |
| 84 | Y | A | 0.0000 | |
| 85 | Y | A | 0.5176 | |
| 86 | C | A | 0.0000 | |
| 87 | A | A | 0.0000 | |
| 88 | R | A | -0.1670 | |
| 89 | A | A | 0.0000 | |
| 90 | R | A | 0.1065 | |
| 91 | I | A | 1.8475 | |
| 92 | Y | A | 2.4505 | |
| 93 | Y | A | 1.8280 | |
| 94 | G | A | 0.6456 | |
| 95 | S | A | 0.9740 | |
| 96 | S | A | 0.9881 | |
| 97 | Y | A | 1.9665 | |
| 98 | F | A | 2.2322 | |
| 99 | D | A | 0.2813 | |
| 100 | Y | A | 0.2930 | |
| 101 | W | A | -0.0092 | |
| 102 | W | A | 0.2696 | |
| 103 | G | A | 0.0239 | |
| 104 | Q | A | -0.6156 | |
| 105 | G | A | 0.0000 | |
| 106 | T | A | 0.5906 | |
| 107 | L | A | 1.5449 | |
| 108 | V | A | 0.0000 | |
| 109 | T | A | 0.3365 | |
| 110 | V | A | 0.0000 | |
| 111 | S | A | -0.6633 | |
| 112 | S | A | -0.8710 |