| Chain sequence(s) |
A: MSHHHHHHSGMKELKEIVEEIKKLLEEHLRMSPGRLEYHKRVLDRFVEDMEKDNFTEKMATFYVMYLVHFLDEVFYRTQHLGDEEEKLSEEVEKAWEEFSEEAKKVIHDESLTPLEKAKKSVELLEKLIPVMEKNKAPEWLIRLVKLTQKILKLLVEYLESKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:40)
[INFO] Main: Simulation completed successfully. (00:05:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1065 | |
| 2 | S | A | -1.0414 | |
| 3 | H | A | -2.0711 | |
| 4 | H | A | -2.3623 | |
| 5 | H | A | -2.5860 | |
| 6 | H | A | -2.7335 | |
| 7 | H | A | -2.9962 | |
| 8 | H | A | -3.0792 | |
| 9 | S | A | -2.3564 | |
| 10 | G | A | -2.4353 | |
| 11 | M | A | 0.0000 | |
| 12 | K | A | -3.6065 | |
| 13 | E | A | -3.2410 | |
| 14 | L | A | 0.0000 | |
| 15 | K | A | -3.6682 | |
| 16 | E | A | -3.8306 | |
| 17 | I | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -3.4777 | |
| 20 | E | A | -2.9164 | |
| 21 | I | A | 0.0000 | |
| 22 | K | A | -2.7525 | |
| 23 | K | A | -3.4189 | |
| 24 | L | A | 0.0000 | |
| 25 | L | A | 0.0000 | |
| 26 | E | A | -3.8940 | |
| 27 | E | A | -3.5535 | |
| 28 | H | A | -2.4436 | |
| 29 | L | A | 0.0000 | |
| 30 | R | A | -2.7305 | |
| 31 | M | A | -1.6731 | |
| 32 | S | A | -1.3502 | |
| 33 | P | A | -1.4957 | |
| 34 | G | A | -1.3464 | |
| 35 | R | A | -1.6425 | |
| 36 | L | A | -2.0283 | |
| 37 | E | A | -2.7333 | |
| 38 | Y | A | -1.4274 | |
| 39 | H | A | 0.0000 | |
| 40 | K | A | -2.6387 | |
| 41 | R | A | -2.9027 | |
| 42 | V | A | -1.7728 | |
| 43 | L | A | 0.0000 | |
| 44 | D | A | -2.6242 | |
| 45 | R | A | -2.9114 | |
| 46 | F | A | 0.0000 | |
| 47 | V | A | 0.0000 | |
| 48 | E | A | -3.5755 | |
| 49 | D | A | 0.0000 | |
| 50 | M | A | 0.0000 | |
| 51 | E | A | -4.2879 | |
| 52 | K | A | -3.8459 | |
| 53 | D | A | -3.3687 | |
| 54 | N | A | -2.9125 | |
| 55 | F | A | -2.2017 | |
| 56 | T | A | -1.6929 | |
| 57 | E | A | -2.5559 | |
| 58 | K | A | -2.2594 | |
| 59 | M | A | -1.0015 | |
| 60 | A | A | 0.0000 | |
| 61 | T | A | -0.8351 | |
| 62 | F | A | 0.3396 | |
| 63 | Y | A | 0.0000 | |
| 64 | V | A | 0.0000 | |
| 65 | M | A | 0.3239 | |
| 66 | Y | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | V | A | 0.0000 | |
| 69 | H | A | -0.5588 | |
| 70 | F | A | 0.0000 | |
| 71 | L | A | 0.0000 | |
| 72 | D | A | -0.6925 | |
| 73 | E | A | -0.0823 | |
| 74 | V | A | 0.0000 | |
| 75 | F | A | 0.0000 | |
| 76 | Y | A | 0.6176 | |
| 77 | R | A | -0.6514 | |
| 78 | T | A | 0.0000 | |
| 79 | Q | A | 0.0000 | |
| 80 | H | A | -1.4147 | |
| 81 | L | A | -1.2759 | |
| 82 | G | A | -2.6976 | |
| 83 | D | A | -4.1129 | |
| 84 | E | A | -4.3503 | |
| 85 | E | A | -3.9886 | |
| 86 | E | A | -3.3845 | |
| 87 | K | A | -3.8930 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | -2.7727 | |
| 90 | E | A | -3.7443 | |
| 91 | E | A | -3.8914 | |
| 92 | V | A | 0.0000 | |
| 93 | E | A | -3.6899 | |
| 94 | K | A | -4.3282 | |
| 95 | A | A | -3.1484 | |
| 96 | W | A | 0.0000 | |
| 97 | E | A | -4.4002 | |
| 98 | E | A | -4.2433 | |
| 99 | F | A | 0.0000 | |
| 100 | S | A | 0.0000 | |
| 101 | E | A | -4.1568 | |
| 102 | E | A | -3.7725 | |
| 103 | A | A | 0.0000 | |
| 104 | K | A | -3.0892 | |
| 105 | K | A | -3.6445 | |
| 106 | V | A | 0.0000 | |
| 107 | I | A | 0.0000 | |
| 108 | H | A | -2.6919 | |
| 109 | D | A | -2.7185 | |
| 110 | E | A | -2.6949 | |
| 111 | S | A | -1.4638 | |
| 112 | L | A | -1.1564 | |
| 113 | T | A | -1.2153 | |
| 114 | P | A | -1.1380 | |
| 115 | L | A | -1.3924 | |
| 116 | E | A | -1.1663 | |
| 117 | K | A | 0.0000 | |
| 118 | A | A | 0.0000 | |
| 119 | K | A | -2.2197 | |
| 120 | K | A | -2.2591 | |
| 121 | S | A | 0.0000 | |
| 122 | V | A | -2.4862 | |
| 123 | E | A | -3.4025 | |
| 124 | L | A | 0.0000 | |
| 125 | L | A | 0.0000 | |
| 126 | E | A | -3.4014 | |
| 127 | K | A | -2.8888 | |
| 128 | L | A | 0.0000 | |
| 129 | I | A | -1.7207 | |
| 130 | P | A | -1.9501 | |
| 131 | V | A | -2.0634 | |
| 132 | M | A | 0.0000 | |
| 133 | E | A | -3.1538 | |
| 134 | K | A | -3.1420 | |
| 135 | N | A | -2.8447 | |
| 136 | K | A | -3.1307 | |
| 137 | A | A | 0.0000 | |
| 138 | P | A | -2.2376 | |
| 139 | E | A | -2.6631 | |
| 140 | W | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | I | A | -1.7282 | |
| 143 | R | A | -1.9840 | |
| 144 | L | A | 0.0000 | |
| 145 | V | A | 0.0000 | |
| 146 | K | A | -1.5866 | |
| 147 | L | A | 0.0000 | |
| 148 | T | A | 0.0000 | |
| 149 | Q | A | -1.7058 | |
| 150 | K | A | -1.5455 | |
| 151 | I | A | 0.0000 | |
| 152 | L | A | 0.0000 | |
| 153 | K | A | -1.8930 | |
| 154 | L | A | -1.5008 | |
| 155 | L | A | 0.0000 | |
| 156 | V | A | 0.0000 | |
| 157 | E | A | -2.8659 | |
| 158 | Y | A | 0.0000 | |
| 159 | L | A | 0.0000 | |
| 160 | E | A | -2.9009 | |
| 161 | S | A | -2.6172 | |
| 162 | K | A | -2.8427 | |
| 163 | N | A | -2.4926 | |
| 164 | S | A | -1.6189 |