| Chain sequence(s) |
A: QVQLQESGGGLVQAGGSLRLSCAASGYIYRRYRMGWYRQAPGKEREFVAGINGGSSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYRIVWDLRVYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.3969 | |
| 2 | V | A | -0.7677 | |
| 3 | Q | A | -1.7675 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.7201 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.2000 | |
| 8 | G | A | -1.0198 | |
| 9 | G | A | -0.8217 | |
| 10 | G | A | -0.0298 | |
| 11 | L | A | 1.0398 | |
| 12 | V | A | 0.0135 | |
| 13 | Q | A | -1.2722 | |
| 14 | A | A | -1.4928 | |
| 15 | G | A | -1.3579 | |
| 16 | G | A | -0.8737 | |
| 17 | S | A | -1.1955 | |
| 18 | L | A | -0.8997 | |
| 19 | R | A | -2.1314 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8598 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.1942 | |
| 24 | A | A | -0.8599 | |
| 25 | S | A | -0.8287 | |
| 26 | G | A | -0.0642 | |
| 27 | Y | A | 0.1778 | |
| 28 | I | A | 0.0000 | |
| 29 | Y | A | 0.0000 | |
| 30 | R | A | -3.0308 | |
| 31 | R | A | -2.6725 | |
| 32 | Y | A | -1.1670 | |
| 33 | R | A | -1.3407 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.2104 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -2.0103 | |
| 40 | A | A | -2.0097 | |
| 41 | P | A | -1.3985 | |
| 42 | G | A | -1.9376 | |
| 43 | K | A | -3.3212 | |
| 44 | E | A | -3.4237 | |
| 45 | R | A | -2.4714 | |
| 46 | E | A | -1.8056 | |
| 47 | F | A | -0.4798 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | N | A | -2.0889 | |
| 53 | G | A | -2.4190 | |
| 54 | G | A | -1.5692 | |
| 55 | S | A | -1.1284 | |
| 56 | S | A | -1.1097 | |
| 57 | T | A | -1.1196 | |
| 58 | N | A | -1.6643 | |
| 59 | Y | A | -1.3549 | |
| 60 | A | A | -1.5563 | |
| 61 | D | A | -2.5366 | |
| 62 | S | A | -1.7614 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.7863 | |
| 65 | G | A | -1.7730 | |
| 66 | R | A | -1.4961 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -1.0038 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.6375 | |
| 71 | R | A | -1.3276 | |
| 72 | D | A | -2.0046 | |
| 73 | N | A | -2.6067 | |
| 74 | A | A | -1.8129 | |
| 75 | K | A | -2.4075 | |
| 76 | N | A | -2.0074 | |
| 77 | T | A | -1.5294 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.6574 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2439 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.3922 | |
| 84 | S | A | -1.2213 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.4038 | |
| 87 | P | A | -1.9047 | |
| 88 | E | A | -2.3587 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.9342 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.5970 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.4724 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | Y | A | 0.3208 | |
| 99 | R | A | 0.1485 | |
| 100 | I | A | 2.3965 | |
| 101 | V | A | 3.1296 | |
| 102 | W | A | 2.4944 | |
| 103 | D | A | 1.3689 | |
| 104 | L | A | 1.3121 | |
| 105 | R | A | -0.5133 | |
| 106 | V | A | 0.2392 | |
| 107 | Y | A | -0.1467 | |
| 108 | W | A | -0.0552 | |
| 109 | G | A | -0.8264 | |
| 110 | Q | A | -1.5825 | |
| 111 | G | A | -1.0061 | |
| 112 | T | A | 0.0000 | |
| 113 | Q | A | -1.1860 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | -0.3063 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -0.7822 | |
| 118 | S | A | -1.0471 |