Project name: query_structure

Status: done

Started: 2026-03-16 23:46:36
Settings
Chain sequence(s) A: GVIPCGESCVFIPCISAVIGCSCKSKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-1.9105
Maximal score value
3.1606
Average score
0.6802
Total score value
21.0875

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1862
2 V A 1.6451
3 I A 1.4483
4 P A 0.2899
5 C A 0.6225
6 G A -0.3797
7 E A 0.1478
8 S A 0.3847
9 C A 1.0048
10 V A 1.4998
11 F A 2.7661
12 I A 2.7544
13 P A 1.6182
14 C A 1.8819
15 I A 2.8911
16 S A 2.0916
17 A A 2.0616
18 V A 3.1606
19 I A 2.9223
20 G A 0.9797
21 C A 0.0000
22 S A -0.3669
23 C A -0.4963
24 K A -1.9105
25 S A -1.3744
26 K A -1.2438
27 V A -0.8719
28 C A 0.0000
29 Y A -0.4638
30 R A -0.6159
31 N A -1.1735
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Laboratory of Theory of Biopolymers 2018