| Chain sequence(s) |
A: VNYDIIVRHYNYTGKLKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSMFVALSASVWSLLAIAIERYITMLKMKLHNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRSRRLTFKSLALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:11)
[INFO] Main: Simulation completed successfully. (00:04:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 20 | V | A | 1.3471 | |
| 21 | N | A | -0.1479 | |
| 22 | Y | A | 0.0795 | |
| 23 | D | A | -1.5208 | |
| 24 | I | A | -0.2816 | |
| 25 | I | A | 0.0000 | |
| 26 | V | A | -1.0129 | |
| 27 | R | A | -1.7560 | |
| 28 | H | A | 0.0000 | |
| 29 | Y | A | 0.0000 | |
| 30 | N | A | -1.3761 | |
| 31 | Y | A | -0.7083 | |
| 32 | T | A | 0.0000 | |
| 33 | G | A | -0.7643 | |
| 34 | K | A | -0.0866 | |
| 35 | L | A | 0.4411 | |
| 46 | K | A | -0.5481 | |
| 47 | L | A | 1.3772 | |
| 48 | T | A | 0.9682 | |
| 49 | S | A | 1.4301 | |
| 50 | V | A | 2.4689 | |
| 51 | V | A | 2.1696 | |
| 52 | F | A | 0.0000 | |
| 53 | I | A | 2.3983 | |
| 54 | L | A | 2.5067 | |
| 55 | I | A | 2.3547 | |
| 56 | C | A | 0.0000 | |
| 57 | C | A | 2.4745 | |
| 58 | F | A | 2.9743 | |
| 59 | I | A | 0.0000 | |
| 60 | I | A | 2.5880 | |
| 61 | L | A | 2.5400 | |
| 62 | E | A | 1.1830 | |
| 63 | N | A | 0.0000 | |
| 64 | I | A | 2.2214 | |
| 65 | F | A | 2.3376 | |
| 66 | V | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | L | A | 2.1089 | |
| 69 | T | A | 0.0000 | |
| 70 | I | A | 0.0000 | |
| 71 | W | A | -0.3541 | |
| 72 | K | A | -1.6611 | |
| 73 | T | A | -2.0661 | |
| 74 | K | A | -3.3443 | |
| 75 | K | A | -3.4141 | |
| 76 | F | A | 0.0000 | |
| 77 | H | A | -2.7848 | |
| 78 | R | A | -2.5622 | |
| 79 | P | A | -0.9894 | |
| 80 | M | A | -0.2806 | |
| 81 | Y | A | -0.2614 | |
| 82 | Y | A | 0.2506 | |
| 83 | F | A | 0.0000 | |
| 84 | I | A | 0.6310 | |
| 85 | G | A | 0.0000 | |
| 86 | N | A | 0.4077 | |
| 87 | L | A | 0.0000 | |
| 88 | A | A | 0.0000 | |
| 89 | L | A | 1.1265 | |
| 90 | S | A | 0.0000 | |
| 91 | D | A | 0.0000 | |
| 92 | L | A | 1.5517 | |
| 93 | L | A | 1.5033 | |
| 94 | A | A | 0.0000 | |
| 95 | G | A | 0.0000 | |
| 96 | V | A | 1.5960 | |
| 97 | A | A | 0.6819 | |
| 98 | Y | A | 0.0000 | |
| 99 | T | A | 1.2447 | |
| 100 | A | A | 0.8120 | |
| 101 | N | A | 0.4084 | |
| 102 | L | A | 1.0834 | |
| 103 | L | A | 1.9820 | |
| 104 | L | A | 1.0610 | |
| 105 | S | A | 0.2512 | |
| 106 | G | A | -0.3109 | |
| 107 | A | A | -0.2623 | |
| 108 | T | A | -0.4128 | |
| 109 | T | A | -0.3686 | |
| 110 | Y | A | -0.4388 | |
| 111 | K | A | -1.4266 | |
| 112 | L | A | -0.4644 | |
| 113 | T | A | -0.1022 | |
| 114 | P | A | 0.0000 | |
| 115 | A | A | 0.5591 | |
| 116 | Q | A | -0.6390 | |
| 117 | W | A | 0.0000 | |
| 118 | F | A | 0.0000 | |
| 119 | L | A | 1.0115 | |
| 120 | R | A | -0.4762 | |
| 121 | E | A | 0.0000 | |
| 122 | G | A | 0.6911 | |
| 123 | S | A | 0.3718 | |
| 124 | M | A | 0.0000 | |
| 125 | F | A | 0.8769 | |
| 126 | V | A | 1.2665 | |
| 127 | A | A | 0.0000 | |
| 128 | L | A | 0.5120 | |
| 129 | S | A | 0.7383 | |
| 130 | A | A | 0.0000 | |
| 131 | S | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | W | A | 0.5207 | |
| 134 | S | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | L | A | 0.3836 | |
| 137 | A | A | 0.0000 | |
| 138 | I | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | I | A | 0.4163 | |
| 141 | E | A | -0.2571 | |
| 142 | R | A | -0.1663 | |
| 143 | Y | A | 0.2754 | |
| 144 | I | A | 0.5519 | |
| 145 | T | A | 0.0395 | |
| 146 | M | A | 0.3247 | |
| 147 | L | A | 0.0370 | |
| 148 | K | A | -1.1064 | |
| 149 | M | A | -0.1722 | |
| 150 | K | A | -0.9962 | |
| 151 | L | A | 0.1594 | |
| 152 | H | A | -0.8001 | |
| 157 | N | A | -0.4103 | |
| 158 | F | A | 1.1419 | |
| 159 | R | A | -0.5093 | |
| 160 | L | A | 0.0000 | |
| 161 | F | A | 2.0196 | |
| 162 | L | A | 1.2138 | |
| 163 | L | A | 0.0000 | |
| 164 | I | A | 1.1860 | |
| 165 | S | A | 1.2482 | |
| 166 | A | A | 1.3404 | |
| 167 | C | A | 0.0000 | |
| 168 | W | A | 2.1489 | |
| 169 | V | A | 2.8619 | |
| 170 | I | A | 2.5277 | |
| 171 | S | A | 0.0000 | |
| 172 | L | A | 2.9164 | |
| 173 | I | A | 3.2711 | |
| 174 | L | A | 2.0082 | |
| 175 | G | A | 0.0000 | |
| 176 | G | A | 1.8613 | |
| 177 | L | A | 1.6473 | |
| 178 | P | A | 0.0000 | |
| 179 | I | A | 2.5765 | |
| 180 | M | A | 1.8510 | |
| 181 | G | A | 0.7898 | |
| 182 | W | A | 0.4849 | |
| 183 | N | A | -0.0227 | |
| 184 | C | A | 0.0000 | |
| 185 | I | A | 0.2529 | |
| 186 | S | A | 0.1137 | |
| 187 | A | A | 0.1305 | |
| 188 | L | A | 0.2659 | |
| 189 | S | A | 0.1088 | |
| 190 | S | A | -0.4220 | |
| 191 | C | A | 0.0000 | |
| 192 | S | A | -0.5002 | |
| 193 | T | A | -0.2979 | |
| 194 | V | A | 0.3019 | |
| 195 | L | A | 0.1606 | |
| 196 | P | A | 0.0000 | |
| 197 | L | A | 0.0000 | |
| 198 | Y | A | 0.0000 | |
| 199 | H | A | -1.1402 | |
| 200 | K | A | -1.5223 | |
| 201 | H | A | -1.1146 | |
| 202 | Y | A | 0.0000 | |
| 203 | I | A | 0.0000 | |
| 204 | L | A | 0.6015 | |
| 205 | F | A | 0.7900 | |
| 206 | C | A | 1.1456 | |
| 207 | T | A | 1.3590 | |
| 208 | T | A | 1.1346 | |
| 209 | V | A | 1.3062 | |
| 210 | F | A | 1.4755 | |
| 211 | T | A | 1.5345 | |
| 212 | L | A | 2.3774 | |
| 213 | L | A | 1.7786 | |
| 214 | L | A | 2.0883 | |
| 215 | L | A | 2.6506 | |
| 216 | S | A | 1.8189 | |
| 217 | I | A | 0.0000 | |
| 218 | V | A | 1.6109 | |
| 219 | I | A | 1.4969 | |
| 220 | L | A | 0.8584 | |
| 221 | Y | A | 0.0000 | |
| 222 | C | A | 0.6194 | |
| 223 | R | A | -0.6258 | |
| 224 | I | A | 0.0000 | |
| 225 | Y | A | 0.2685 | |
| 226 | S | A | -0.5844 | |
| 227 | L | A | -0.5152 | |
| 228 | V | A | -0.6043 | |
| 229 | R | A | -1.9710 | |
| 230 | T | A | -1.7452 | |
| 231 | R | A | -1.6549 | |
| 232 | S | A | -1.7745 | |
| 233 | R | A | -2.8554 | |
| 234 | R | A | -2.3364 | |
| 235 | L | A | 0.4322 | |
| 236 | T | A | 0.9264 | |
| 237 | F | A | 2.2536 | |
| 250 | K | A | -1.6487 | |
| 251 | S | A | -1.3152 | |
| 252 | L | A | -0.5638 | |
| 253 | A | A | -0.3658 | |
| 254 | L | A | 0.6301 | |
| 255 | L | A | 1.5511 | |
| 256 | K | A | -0.0040 | |
| 257 | T | A | 0.8296 | |
| 258 | V | A | 1.6401 | |
| 259 | I | A | 2.4018 | |
| 260 | I | A | 1.5991 | |
| 261 | V | A | 1.3772 | |
| 262 | L | A | 1.5427 | |
| 263 | S | A | 1.2200 | |
| 264 | V | A | 1.1418 | |
| 265 | F | A | 0.0000 | |
| 266 | I | A | 0.9981 | |
| 267 | A | A | 0.6158 | |
| 268 | C | A | 0.7898 | |
| 269 | W | A | 0.0000 | |
| 270 | A | A | 1.1087 | |
| 271 | P | A | 1.4633 | |
| 272 | L | A | 1.5549 | |
| 273 | F | A | 2.0157 | |
| 274 | I | A | 2.8250 | |
| 275 | L | A | 0.0000 | |
| 276 | L | A | 1.7063 | |
| 277 | L | A | 2.0417 | |
| 278 | L | A | 1.7204 | |
| 279 | D | A | 0.0000 | |
| 280 | V | A | 0.0000 | |
| 281 | G | A | -0.3203 | |
| 282 | C | A | -0.9583 | |
| 283 | K | A | -1.9164 | |
| 284 | V | A | -1.3791 | |
| 285 | K | A | -2.2197 | |
| 286 | T | A | -1.4516 | |
| 287 | C | A | -0.8082 | |
| 288 | D | A | -1.2114 | |
| 289 | I | A | 0.4540 | |
| 290 | L | A | 0.0000 | |
| 291 | F | A | 0.5263 | |
| 292 | R | A | -0.9632 | |
| 293 | A | A | -0.3307 | |
| 294 | E | A | -1.2867 | |
| 295 | Y | A | 0.0343 | |
| 296 | F | A | 0.6818 | |
| 297 | L | A | 0.5082 | |
| 298 | V | A | 0.7725 | |
| 299 | L | A | 1.0609 | |
| 300 | A | A | 0.0000 | |
| 301 | V | A | 0.0000 | |
| 302 | L | A | 1.0378 | |
| 303 | N | A | 0.0000 | |
| 304 | S | A | 0.0000 | |
| 305 | G | A | 0.6678 | |
| 306 | T | A | 0.2322 | |
| 307 | N | A | 0.0000 | |
| 308 | P | A | 0.0000 | |
| 309 | I | A | 0.7166 | |
| 310 | I | A | 0.0000 | |
| 311 | Y | A | 0.7540 | |
| 312 | T | A | 0.0000 | |
| 313 | L | A | 0.4217 | |
| 314 | T | A | -0.4163 | |
| 315 | N | A | -1.7557 | |
| 316 | K | A | -3.2852 | |
| 317 | E | A | -3.2720 | |
| 318 | M | A | 0.0000 | |
| 319 | R | A | -2.8043 | |
| 320 | R | A | -3.0288 | |
| 321 | A | A | -1.1806 | |
| 322 | F | A | 0.3790 | |
| 323 | I | A | 0.9413 | |
| 324 | R | A | 0.1217 | |
| 325 | I | A | 2.1728 |